Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga7Q6DD96 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga7Q6DD96 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga7Q6DD96 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga7Q6DD96 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.35■□□□□ 0.05
Pcdhga7Q6DD96 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.35■□□□□ 0.05
Pcdhga7Q6DD96 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga7Q6DD96 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga7Q6DD96 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga7Q6DD96 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga7Q6DD96 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga7Q6DD96 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
Pcdhga7Q6DD96 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhga7Q6DD96 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga7Q6DD96 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga7Q6DD96 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.34■□□□□ 0.05
Pcdhga7Q6DD96 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga7Q6DD96 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga7Q6DD96 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Pcdhga7Q6DD96 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.34■□□□□ 0.05
Pcdhga7Q6DD96 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhga7Q6DD96 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC15.34■□□□□ 0.05
Pcdhga7Q6DD96 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Pcdhga7Q6DD96 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhga7Q6DD96 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
Pcdhga7Q6DD96 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.34■□□□□ 0.05
Pcdhga7Q6DD96 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga7Q6DD96 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.34■□□□□ 0.05
Pcdhga7Q6DD96 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga7Q6DD96 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Pcdhga7Q6DD96 Gm9987-201ENSMUST00000069768 567 ntBASIC15.34■□□□□ 0.05
Pcdhga7Q6DD96 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga7Q6DD96 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga7Q6DD96 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga7Q6DD96 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga7Q6DD96 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga7Q6DD96 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga7Q6DD96 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga7Q6DD96 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga7Q6DD96 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga7Q6DD96 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga7Q6DD96 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Pcdhga7Q6DD96 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhga7Q6DD96 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhga7Q6DD96 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhga7Q6DD96 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhga7Q6DD96 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhga7Q6DD96 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga7Q6DD96 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Pcdhga7Q6DD96 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga7Q6DD96 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Pcdhga7Q6DD96 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Pcdhga7Q6DD96 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga7Q6DD96 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga7Q6DD96 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga7Q6DD96 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.33■□□□□ 0.04
Pcdhga7Q6DD96 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Pcdhga7Q6DD96 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga7Q6DD96 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga7Q6DD96 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga7Q6DD96 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga7Q6DD96 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
Pcdhga7Q6DD96 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga7Q6DD96 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga7Q6DD96 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.33■□□□□ 0.04
Pcdhga7Q6DD96 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Pcdhga7Q6DD96 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga7Q6DD96 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga7Q6DD96 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga7Q6DD96 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga7Q6DD96 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga7Q6DD96 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Pcdhga7Q6DD96 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga7Q6DD96 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga7Q6DD96 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga7Q6DD96 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga7Q6DD96 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga7Q6DD96 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga7Q6DD96 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga7Q6DD96 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga7Q6DD96 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga7Q6DD96 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.32■□□□□ 0.04
Pcdhga7Q6DD96 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga7Q6DD96 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga7Q6DD96 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga7Q6DD96 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga7Q6DD96 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga7Q6DD96 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga7Q6DD96 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga7Q6DD96 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga7Q6DD96 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Pcdhga7Q6DD96 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdhga7Q6DD96 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Pcdhga7Q6DD96 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga7Q6DD96 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga7Q6DD96 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga7Q6DD96 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga7Q6DD96 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.31■□□□□ 0.04
Pcdhga7Q6DD96 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdhga7Q6DD96 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms