Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Scube3Q66PY1 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scube3Q66PY1 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scube3Q66PY1 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scube3Q66PY1 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scube3Q66PY1 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scube3Q66PY1 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scube3Q66PY1 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scube3Q66PY1 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.55■□□□□ 0.24
Scube3Q66PY1 Gm7862-201ENSMUST00000121461 292 ntBASIC16.55■□□□□ 0.24
Scube3Q66PY1 Gm11780-201ENSMUST00000136880 516 ntBASIC16.55■□□□□ 0.24
Scube3Q66PY1 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.55■□□□□ 0.24
Scube3Q66PY1 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scube3Q66PY1 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scube3Q66PY1 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.55■□□□□ 0.24
Scube3Q66PY1 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.55■□□□□ 0.24
Scube3Q66PY1 AC158982.1-201ENSMUST00000228377 901 ntBASIC16.55■□□□□ 0.24
Scube3Q66PY1 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scube3Q66PY1 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scube3Q66PY1 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Scube3Q66PY1 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scube3Q66PY1 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scube3Q66PY1 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scube3Q66PY1 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scube3Q66PY1 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scube3Q66PY1 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scube3Q66PY1 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Scube3Q66PY1 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Scube3Q66PY1 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scube3Q66PY1 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Scube3Q66PY1 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scube3Q66PY1 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Scube3Q66PY1 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Scube3Q66PY1 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scube3Q66PY1 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.54■□□□□ 0.24
Scube3Q66PY1 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scube3Q66PY1 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.54■□□□□ 0.24
Scube3Q66PY1 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.54■□□□□ 0.24
Scube3Q66PY1 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Scube3Q66PY1 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Scube3Q66PY1 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.54■□□□□ 0.24
Scube3Q66PY1 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Scube3Q66PY1 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.54■□□□□ 0.24
Scube3Q66PY1 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
Scube3Q66PY1 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scube3Q66PY1 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scube3Q66PY1 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scube3Q66PY1 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scube3Q66PY1 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Scube3Q66PY1 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scube3Q66PY1 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scube3Q66PY1 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
Scube3Q66PY1 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scube3Q66PY1 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scube3Q66PY1 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scube3Q66PY1 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Scube3Q66PY1 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.53■□□□□ 0.24
Scube3Q66PY1 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scube3Q66PY1 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scube3Q66PY1 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scube3Q66PY1 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Scube3Q66PY1 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Scube3Q66PY1 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scube3Q66PY1 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scube3Q66PY1 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scube3Q66PY1 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.53■□□□□ 0.24
Scube3Q66PY1 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scube3Q66PY1 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scube3Q66PY1 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Scube3Q66PY1 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Scube3Q66PY1 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Scube3Q66PY1 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Scube3Q66PY1 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scube3Q66PY1 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.52■□□□□ 0.24
Scube3Q66PY1 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scube3Q66PY1 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Scube3Q66PY1 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scube3Q66PY1 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Scube3Q66PY1 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Scube3Q66PY1 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Scube3Q66PY1 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.52■□□□□ 0.24
Scube3Q66PY1 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Scube3Q66PY1 Gm6443-201ENSMUST00000203599 874 ntBASIC16.52■□□□□ 0.24
Scube3Q66PY1 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.52■□□□□ 0.24
Scube3Q66PY1 Gm43930-201ENSMUST00000203868 845 ntBASIC16.52■□□□□ 0.24
Scube3Q66PY1 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
Scube3Q66PY1 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scube3Q66PY1 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scube3Q66PY1 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Scube3Q66PY1 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scube3Q66PY1 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scube3Q66PY1 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Scube3Q66PY1 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Scube3Q66PY1 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Scube3Q66PY1 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Scube3Q66PY1 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scube3Q66PY1 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scube3Q66PY1 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scube3Q66PY1 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scube3Q66PY1 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms