Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Six2Q62232 BC037039-201ENSMUST00000192003 2205 ntBASIC16.81■□□□□ 0.28
Six2Q62232 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six2Q62232 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six2Q62232 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six2Q62232 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six2Q62232 Gm15372-201ENSMUST00000120729 834 ntBASIC16.81■□□□□ 0.28
Six2Q62232 Gm7977-201ENSMUST00000193787 748 ntBASIC16.81■□□□□ 0.28
Six2Q62232 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six2Q62232 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.81■□□□□ 0.28
Six2Q62232 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.81■□□□□ 0.28
Six2Q62232 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six2Q62232 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six2Q62232 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.81■□□□□ 0.28
Six2Q62232 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Six2Q62232 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six2Q62232 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six2Q62232 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six2Q62232 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six2Q62232 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six2Q62232 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six2Q62232 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six2Q62232 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six2Q62232 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Six2Q62232 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six2Q62232 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six2Q62232 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Six2Q62232 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six2Q62232 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six2Q62232 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Six2Q62232 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.8■□□□□ 0.28
Six2Q62232 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Six2Q62232 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Six2Q62232 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Six2Q62232 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six2Q62232 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six2Q62232 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six2Q62232 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Six2Q62232 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Six2Q62232 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.8■□□□□ 0.28
Six2Q62232 Gm7506-201ENSMUST00000207758 815 ntBASIC16.8■□□□□ 0.28
Six2Q62232 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six2Q62232 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.8■□□□□ 0.28
Six2Q62232 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six2Q62232 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six2Q62232 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six2Q62232 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six2Q62232 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six2Q62232 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Six2Q62232 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six2Q62232 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six2Q62232 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Six2Q62232 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six2Q62232 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six2Q62232 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six2Q62232 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Six2Q62232 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Six2Q62232 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Six2Q62232 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.79■□□□□ 0.28
Six2Q62232 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six2Q62232 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six2Q62232 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Six2Q62232 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six2Q62232 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Six2Q62232 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six2Q62232 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Six2Q62232 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.79■□□□□ 0.28
Six2Q62232 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.79■□□□□ 0.28
Six2Q62232 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six2Q62232 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six2Q62232 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Six2Q62232 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six2Q62232 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six2Q62232 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six2Q62232 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six2Q62232 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six2Q62232 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six2Q62232 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Six2Q62232 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Six2Q62232 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Six2Q62232 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Six2Q62232 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Six2Q62232 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Six2Q62232 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Six2Q62232 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Six2Q62232 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Six2Q62232 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Six2Q62232 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Six2Q62232 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Six2Q62232 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Six2Q62232 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Six2Q62232 Gm12895-201ENSMUST00000122214 226 ntBASIC16.78■□□□□ 0.28
Six2Q62232 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.78■□□□□ 0.28
Six2Q62232 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Six2Q62232 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.78■□□□□ 0.28
Six2Q62232 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Six2Q62232 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Six2Q62232 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Six2Q62232 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Six2Q62232 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms