Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Gm5898-201ENSMUST00000121016 2071 ntBASIC12.14□□□□□ -0.47
Notch3Q61982 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Notch3Q61982 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Notch3Q61982 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Notch3Q61982 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Notch3Q61982 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Notch3Q61982 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Notch3Q61982 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Notch3Q61982 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.14□□□□□ -0.47
Notch3Q61982 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Notch3Q61982 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Notch3Q61982 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Notch3Q61982 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Notch3Q61982 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Notch3Q61982 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Notch3Q61982 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Notch3Q61982 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC12.13□□□□□ -0.47
Notch3Q61982 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Notch3Q61982 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Notch3Q61982 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Notch3Q61982 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.13□□□□□ -0.47
Notch3Q61982 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC12.13□□□□□ -0.47
Notch3Q61982 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Notch3Q61982 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Notch3Q61982 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Notch3Q61982 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Notch3Q61982 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Notch3Q61982 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Notch3Q61982 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Notch3Q61982 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Notch3Q61982 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Notch3Q61982 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Notch3Q61982 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Notch3Q61982 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Notch3Q61982 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Notch3Q61982 Gm25990-201ENSMUST00000102440 86 ntBASIC12.12□□□□□ -0.47
Notch3Q61982 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Notch3Q61982 Gm13418-201ENSMUST00000119097 944 ntBASIC12.12□□□□□ -0.47
Notch3Q61982 Gm15173-201ENSMUST00000122049 433 ntBASIC12.12□□□□□ -0.47
Notch3Q61982 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Notch3Q61982 Gm6550-201ENSMUST00000187574 993 ntBASIC12.12□□□□□ -0.47
Notch3Q61982 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.12□□□□□ -0.47
Notch3Q61982 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC12.12□□□□□ -0.47
Notch3Q61982 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.12□□□□□ -0.47
Notch3Q61982 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Notch3Q61982 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Notch3Q61982 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Notch3Q61982 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Notch3Q61982 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Notch3Q61982 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Notch3Q61982 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Notch3Q61982 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Notch3Q61982 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Notch3Q61982 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Notch3Q61982 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Notch3Q61982 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Notch3Q61982 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Notch3Q61982 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC12.12□□□□□ -0.47
Notch3Q61982 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC12.12□□□□□ -0.47
Notch3Q61982 Gm27628-201ENSMUST00000184911 107 ntBASIC12.12□□□□□ -0.47
Notch3Q61982 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Notch3Q61982 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.12□□□□□ -0.47
Notch3Q61982 Gm19439-201ENSMUST00000198195 2273 ntBASIC12.12□□□□□ -0.47
Notch3Q61982 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Notch3Q61982 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.12□□□□□ -0.47
Notch3Q61982 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Notch3Q61982 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Notch3Q61982 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Notch3Q61982 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Notch3Q61982 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Notch3Q61982 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Notch3Q61982 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Notch3Q61982 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Notch3Q61982 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Notch3Q61982 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Notch3Q61982 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Notch3Q61982 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Notch3Q61982 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC12.11□□□□□ -0.47
Notch3Q61982 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Notch3Q61982 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.11□□□□□ -0.47
Notch3Q61982 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC12.11□□□□□ -0.47
Notch3Q61982 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC12.11□□□□□ -0.47
Notch3Q61982 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Notch3Q61982 Gm4535-201ENSMUST00000182274 558 ntBASIC12.11□□□□□ -0.47
Notch3Q61982 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.11□□□□□ -0.47
Notch3Q61982 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Notch3Q61982 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Notch3Q61982 Gm10355-201ENSMUST00000097146 517 ntBASIC12.11□□□□□ -0.47
Notch3Q61982 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Notch3Q61982 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Notch3Q61982 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Notch3Q61982 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Notch3Q61982 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Notch3Q61982 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Notch3Q61982 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Notch3Q61982 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Notch3Q61982 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.11□□□□□ -0.47
Notch3Q61982 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Notch3Q61982 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Notch3Q61982 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms