Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Foxc1Q61572 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Foxc1Q61572 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Foxc1Q61572 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Foxc1Q61572 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Foxc1Q61572 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Foxc1Q61572 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Foxc1Q61572 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Foxc1Q61572 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Foxc1Q61572 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Foxc1Q61572 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Foxc1Q61572 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Foxc1Q61572 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Foxc1Q61572 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Foxc1Q61572 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Foxc1Q61572 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Foxc1Q61572 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Foxc1Q61572 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Foxc1Q61572 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Foxc1Q61572 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Foxc1Q61572 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Foxc1Q61572 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Foxc1Q61572 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Foxc1Q61572 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Foxc1Q61572 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Foxc1Q61572 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC11.6□□□□□ -0.55
Foxc1Q61572 Gm13216-201ENSMUST00000117145 591 ntBASIC11.6□□□□□ -0.55
Foxc1Q61572 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Foxc1Q61572 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Foxc1Q61572 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Foxc1Q61572 Gm28659-201ENSMUST00000188013 759 ntBASIC11.6□□□□□ -0.55
Foxc1Q61572 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC11.6□□□□□ -0.55
Foxc1Q61572 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Foxc1Q61572 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Foxc1Q61572 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Foxc1Q61572 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC11.6□□□□□ -0.55
Foxc1Q61572 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Foxc1Q61572 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Foxc1Q61572 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Foxc1Q61572 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Foxc1Q61572 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Foxc1Q61572 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC11.6□□□□□ -0.55
Foxc1Q61572 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Foxc1Q61572 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Foxc1Q61572 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Foxc1Q61572 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Foxc1Q61572 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Foxc1Q61572 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Foxc1Q61572 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Foxc1Q61572 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Foxc1Q61572 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Foxc1Q61572 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Foxc1Q61572 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Foxc1Q61572 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Foxc1Q61572 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Foxc1Q61572 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC11.59□□□□□ -0.55
Foxc1Q61572 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Foxc1Q61572 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Foxc1Q61572 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Foxc1Q61572 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Foxc1Q61572 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Foxc1Q61572 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Foxc1Q61572 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Foxc1Q61572 Gm13263-201ENSMUST00000121271 838 ntBASIC11.59□□□□□ -0.55
Foxc1Q61572 Gm13366-201ENSMUST00000122198 970 ntBASIC11.59□□□□□ -0.55
Foxc1Q61572 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Foxc1Q61572 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC11.59□□□□□ -0.55
Foxc1Q61572 Gm23958-201ENSMUST00000157207 105 ntBASIC11.59□□□□□ -0.55
Foxc1Q61572 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Foxc1Q61572 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC11.59□□□□□ -0.55
Foxc1Q61572 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC11.59□□□□□ -0.55
Foxc1Q61572 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
Foxc1Q61572 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
Foxc1Q61572 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
Foxc1Q61572 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC11.59□□□□□ -0.55
Foxc1Q61572 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Foxc1Q61572 Gm36967-201ENSMUST00000193814 266 ntBASIC11.59□□□□□ -0.55
Foxc1Q61572 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Foxc1Q61572 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC11.59□□□□□ -0.55
Foxc1Q61572 Gm44771-201ENSMUST00000206975 626 ntBASIC11.59□□□□□ -0.55
Foxc1Q61572 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Foxc1Q61572 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Foxc1Q61572 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Foxc1Q61572 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Foxc1Q61572 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Foxc1Q61572 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Foxc1Q61572 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Foxc1Q61572 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC11.59□□□□□ -0.55
Foxc1Q61572 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Foxc1Q61572 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Foxc1Q61572 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Foxc1Q61572 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Foxc1Q61572 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Foxc1Q61572 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Foxc1Q61572 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Foxc1Q61572 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Foxc1Q61572 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Foxc1Q61572 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Foxc1Q61572 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Foxc1Q61572 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms