Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC17.4■□□□□ 0.38
Ecm1Q61508 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC17.4■□□□□ 0.38
Ecm1Q61508 Gm5628-201ENSMUST00000222318 1049 ntBASIC17.4■□□□□ 0.38
Ecm1Q61508 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Ecm1Q61508 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.4■□□□□ 0.38
Ecm1Q61508 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ecm1Q61508 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ecm1Q61508 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ecm1Q61508 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ecm1Q61508 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ecm1Q61508 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ecm1Q61508 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ecm1Q61508 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.4■□□□□ 0.38
Ecm1Q61508 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ecm1Q61508 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ecm1Q61508 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ecm1Q61508 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ecm1Q61508 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ecm1Q61508 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Ecm1Q61508 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ecm1Q61508 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ecm1Q61508 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ecm1Q61508 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ecm1Q61508 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ecm1Q61508 AA543401-201ENSMUST00000164248 1269 ntBASIC17.39■□□□□ 0.37
Ecm1Q61508 Mir6990-201ENSMUST00000183724 91 ntBASIC17.39■□□□□ 0.37
Ecm1Q61508 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.39■□□□□ 0.37
Ecm1Q61508 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.39■□□□□ 0.37
Ecm1Q61508 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ecm1Q61508 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ecm1Q61508 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ecm1Q61508 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ecm1Q61508 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ecm1Q61508 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ecm1Q61508 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ecm1Q61508 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ecm1Q61508 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ecm1Q61508 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Ecm1Q61508 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ecm1Q61508 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ecm1Q61508 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ecm1Q61508 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC17.38■□□□□ 0.37
Ecm1Q61508 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ecm1Q61508 Rprl2-201ENSMUST00000157150 290 ntBASIC17.38■□□□□ 0.37
Ecm1Q61508 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ecm1Q61508 Gm18889-201ENSMUST00000174284 929 ntBASIC17.38■□□□□ 0.37
Ecm1Q61508 Rpph1-201ENSMUST00000175096 319 ntBASIC17.38■□□□□ 0.37
Ecm1Q61508 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ecm1Q61508 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.38■□□□□ 0.37
Ecm1Q61508 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ecm1Q61508 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ecm1Q61508 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ecm1Q61508 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ecm1Q61508 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ecm1Q61508 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ecm1Q61508 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ecm1Q61508 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC17.37■□□□□ 0.37
Ecm1Q61508 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ecm1Q61508 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ecm1Q61508 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ecm1Q61508 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ecm1Q61508 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Ecm1Q61508 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ecm1Q61508 Gm8318-201ENSMUST00000182954 872 ntBASIC17.37■□□□□ 0.37
Ecm1Q61508 Gm43474-201ENSMUST00000196415 774 ntBASIC17.37■□□□□ 0.37
Ecm1Q61508 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.37■□□□□ 0.37
Ecm1Q61508 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.37■□□□□ 0.37
Ecm1Q61508 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ecm1Q61508 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Ecm1Q61508 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Ecm1Q61508 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Ecm1Q61508 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Ecm1Q61508 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ecm1Q61508 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ecm1Q61508 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Ecm1Q61508 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ecm1Q61508 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.36■□□□□ 0.37
Ecm1Q61508 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ecm1Q61508 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ecm1Q61508 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC17.36■□□□□ 0.37
Ecm1Q61508 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC17.36■□□□□ 0.37
Ecm1Q61508 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC17.36■□□□□ 0.37
Ecm1Q61508 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ecm1Q61508 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ecm1Q61508 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ecm1Q61508 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ecm1Q61508 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ecm1Q61508 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ecm1Q61508 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ecm1Q61508 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ecm1Q61508 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ecm1Q61508 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ecm1Q61508 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.36■□□□□ 0.37
Ecm1Q61508 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Ecm1Q61508 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ecm1Q61508 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ecm1Q61508 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ecm1Q61508 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.35■□□□□ 0.37
Ecm1Q61508 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ecm1Q61508 Gm9385-201ENSMUST00000117563 472 ntBASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms