Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Clcn4Q61418 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Clcn4Q61418 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Clcn4Q61418 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.58□□□□□ -0.08
Clcn4Q61418 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.58□□□□□ -0.08
Clcn4Q61418 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Clcn4Q61418 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Clcn4Q61418 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Clcn4Q61418 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Clcn4Q61418 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Clcn4Q61418 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Clcn4Q61418 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Clcn4Q61418 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clcn4Q61418 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Clcn4Q61418 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clcn4Q61418 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clcn4Q61418 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clcn4Q61418 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clcn4Q61418 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clcn4Q61418 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Clcn4Q61418 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.57□□□□□ -0.08
Clcn4Q61418 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Clcn4Q61418 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Clcn4Q61418 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clcn4Q61418 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
Clcn4Q61418 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clcn4Q61418 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clcn4Q61418 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clcn4Q61418 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Clcn4Q61418 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clcn4Q61418 Gm11950-201ENSMUST00000121615 838 ntBASIC14.57□□□□□ -0.08
Clcn4Q61418 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.57□□□□□ -0.08
Clcn4Q61418 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Clcn4Q61418 Gm37722-201ENSMUST00000193757 208 ntBASIC14.57□□□□□ -0.08
Clcn4Q61418 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clcn4Q61418 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clcn4Q61418 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clcn4Q61418 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clcn4Q61418 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clcn4Q61418 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clcn4Q61418 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clcn4Q61418 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Clcn4Q61418 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Clcn4Q61418 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Clcn4Q61418 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clcn4Q61418 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clcn4Q61418 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clcn4Q61418 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clcn4Q61418 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Clcn4Q61418 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Clcn4Q61418 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Clcn4Q61418 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Clcn4Q61418 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Clcn4Q61418 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Clcn4Q61418 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Clcn4Q61418 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.56□□□□□ -0.08
Clcn4Q61418 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Clcn4Q61418 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Clcn4Q61418 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Clcn4Q61418 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.56□□□□□ -0.08
Clcn4Q61418 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.56□□□□□ -0.08
Clcn4Q61418 Gm17807-201ENSMUST00000186869 298 ntBASIC14.56□□□□□ -0.08
Clcn4Q61418 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.56□□□□□ -0.08
Clcn4Q61418 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.56□□□□□ -0.08
Clcn4Q61418 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Clcn4Q61418 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
Clcn4Q61418 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Clcn4Q61418 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Clcn4Q61418 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Clcn4Q61418 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Clcn4Q61418 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Clcn4Q61418 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Clcn4Q61418 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Clcn4Q61418 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Clcn4Q61418 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clcn4Q61418 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clcn4Q61418 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Clcn4Q61418 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clcn4Q61418 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clcn4Q61418 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Clcn4Q61418 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clcn4Q61418 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clcn4Q61418 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.55□□□□□ -0.08
Clcn4Q61418 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clcn4Q61418 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Clcn4Q61418 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clcn4Q61418 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.55□□□□□ -0.08
Clcn4Q61418 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.55□□□□□ -0.08
Clcn4Q61418 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clcn4Q61418 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Clcn4Q61418 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clcn4Q61418 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Clcn4Q61418 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clcn4Q61418 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Clcn4Q61418 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clcn4Q61418 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Clcn4Q61418 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clcn4Q61418 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Clcn4Q61418 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clcn4Q61418 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms