Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Ift88Q61371 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
Ift88Q61371 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.49■□□□□ 0.39
Ift88Q61371 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ift88Q61371 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ift88Q61371 Sybu-209ENSMUST00000228639 4113 ntBASIC17.49■□□□□ 0.39
Ift88Q61371 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.49■□□□□ 0.39
Ift88Q61371 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Ift88Q61371 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Ift88Q61371 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ift88Q61371 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ift88Q61371 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ift88Q61371 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ift88Q61371 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC17.48■□□□□ 0.39
Ift88Q61371 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Ift88Q61371 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ift88Q61371 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.48■□□□□ 0.39
Ift88Q61371 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.48■□□□□ 0.39
Ift88Q61371 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ift88Q61371 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.48■□□□□ 0.39
Ift88Q61371 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ift88Q61371 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ift88Q61371 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ift88Q61371 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ift88Q61371 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ift88Q61371 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Ift88Q61371 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ift88Q61371 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ift88Q61371 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.47■□□□□ 0.39
Ift88Q61371 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ift88Q61371 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ift88Q61371 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Ift88Q61371 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ift88Q61371 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ift88Q61371 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ift88Q61371 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Ift88Q61371 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ift88Q61371 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.47■□□□□ 0.39
Ift88Q61371 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.47■□□□□ 0.39
Ift88Q61371 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Ift88Q61371 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ift88Q61371 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Ift88Q61371 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ift88Q61371 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ift88Q61371 Gm18101-201ENSMUST00000215769 548 ntBASIC17.47■□□□□ 0.39
Ift88Q61371 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.47■□□□□ 0.39
Ift88Q61371 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ift88Q61371 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Ift88Q61371 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.47■□□□□ 0.39
Ift88Q61371 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ift88Q61371 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Ift88Q61371 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ift88Q61371 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.47■□□□□ 0.39
Ift88Q61371 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ift88Q61371 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ift88Q61371 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ift88Q61371 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ift88Q61371 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ift88Q61371 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ift88Q61371 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ift88Q61371 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ift88Q61371 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ift88Q61371 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ift88Q61371 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ift88Q61371 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Ift88Q61371 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ift88Q61371 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ift88Q61371 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ift88Q61371 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ift88Q61371 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ift88Q61371 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ift88Q61371 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ift88Q61371 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.46■□□□□ 0.39
Ift88Q61371 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ift88Q61371 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Ift88Q61371 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ift88Q61371 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ift88Q61371 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ift88Q61371 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.46■□□□□ 0.39
Ift88Q61371 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ift88Q61371 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.46■□□□□ 0.39
Ift88Q61371 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.46■□□□□ 0.39
Ift88Q61371 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ift88Q61371 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Ift88Q61371 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ift88Q61371 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ift88Q61371 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ift88Q61371 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ift88Q61371 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ift88Q61371 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ift88Q61371 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.46■□□□□ 0.39
Ift88Q61371 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Ift88Q61371 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ift88Q61371 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ift88Q61371 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Ift88Q61371 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
Ift88Q61371 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ift88Q61371 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Ift88Q61371 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ift88Q61371 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms