Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
Col11a1Q61245 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col11a1Q61245 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col11a1Q61245 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col11a1Q61245 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.52■□□□□ 0.4
Col11a1Q61245 Gm18737-201ENSMUST00000173594 937 ntBASIC17.52■□□□□ 0.4
Col11a1Q61245 Gm27920-201ENSMUST00000183953 96 ntBASIC17.52■□□□□ 0.4
Col11a1Q61245 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col11a1Q61245 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Col11a1Q61245 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC17.52■□□□□ 0.4
Col11a1Q61245 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col11a1Q61245 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.52■□□□□ 0.4
Col11a1Q61245 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col11a1Q61245 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col11a1Q61245 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
Col11a1Q61245 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.52■□□□□ 0.39
Col11a1Q61245 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.52■□□□□ 0.39
Col11a1Q61245 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col11a1Q61245 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col11a1Q61245 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.52■□□□□ 0.39
Col11a1Q61245 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Col11a1Q61245 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col11a1Q61245 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC17.51■□□□□ 0.39
Col11a1Q61245 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col11a1Q61245 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col11a1Q61245 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col11a1Q61245 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col11a1Q61245 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC17.51■□□□□ 0.39
Col11a1Q61245 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col11a1Q61245 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC17.51■□□□□ 0.39
Col11a1Q61245 Gm16215-201ENSMUST00000161990 637 ntBASIC17.51■□□□□ 0.39
Col11a1Q61245 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.51■□□□□ 0.39
Col11a1Q61245 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col11a1Q61245 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Col11a1Q61245 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC17.51■□□□□ 0.39
Col11a1Q61245 Gm6888-201ENSMUST00000221983 706 ntBASIC17.51■□□□□ 0.39
Col11a1Q61245 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col11a1Q61245 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC17.51■□□□□ 0.39
Col11a1Q61245 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col11a1Q61245 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Col11a1Q61245 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col11a1Q61245 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col11a1Q61245 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.51■□□□□ 0.39
Col11a1Q61245 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col11a1Q61245 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col11a1Q61245 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col11a1Q61245 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col11a1Q61245 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col11a1Q61245 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col11a1Q61245 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col11a1Q61245 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Col11a1Q61245 AC135669.1-201ENSMUST00000213585 412 ntBASIC17.5■□□□□ 0.39
Col11a1Q61245 Gm7775-201ENSMUST00000218871 853 ntBASIC17.5■□□□□ 0.39
Col11a1Q61245 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col11a1Q61245 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col11a1Q61245 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col11a1Q61245 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC17.5■□□□□ 0.39
Col11a1Q61245 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.5■□□□□ 0.39
Col11a1Q61245 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col11a1Q61245 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col11a1Q61245 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col11a1Q61245 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col11a1Q61245 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col11a1Q61245 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Col11a1Q61245 Gm11543-201ENSMUST00000120758 370 ntBASIC17.49■□□□□ 0.39
Col11a1Q61245 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col11a1Q61245 Gm25144-201ENSMUST00000179561 110 ntBASIC17.49■□□□□ 0.39
Col11a1Q61245 Gm25352-201ENSMUST00000179815 110 ntBASIC17.49■□□□□ 0.39
Col11a1Q61245 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Col11a1Q61245 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col11a1Q61245 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Col11a1Q61245 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Col11a1Q61245 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.49■□□□□ 0.39
Col11a1Q61245 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col11a1Q61245 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col11a1Q61245 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.49■□□□□ 0.39
Col11a1Q61245 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.49■□□□□ 0.39
Col11a1Q61245 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col11a1Q61245 Gm15487-201ENSMUST00000122373 465 ntBASIC17.49■□□□□ 0.39
Col11a1Q61245 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Col11a1Q61245 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col11a1Q61245 Gm9824-201ENSMUST00000178707 561 ntBASIC17.49■□□□□ 0.39
Col11a1Q61245 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Col11a1Q61245 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col11a1Q61245 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.49■□□□□ 0.39
Col11a1Q61245 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col11a1Q61245 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col11a1Q61245 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col11a1Q61245 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.48■□□□□ 0.39
Col11a1Q61245 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col11a1Q61245 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col11a1Q61245 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Col11a1Q61245 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col11a1Q61245 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col11a1Q61245 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col11a1Q61245 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Col11a1Q61245 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col11a1Q61245 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC17.48■□□□□ 0.39
Col11a1Q61245 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Col11a1Q61245 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms