Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav7d-4Q5R1H9 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trav7d-4Q5R1H9 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav7d-4Q5R1H9 Gm6190-201ENSMUST00000220683 1374 ntBASIC12.07□□□□□ -0.48
Trav7d-4Q5R1H9 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7d-4Q5R1H9 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7d-4Q5R1H9 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Trav7d-4Q5R1H9 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav7d-4Q5R1H9 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7d-4Q5R1H9 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7d-4Q5R1H9 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7d-4Q5R1H9 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7d-4Q5R1H9 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav7d-4Q5R1H9 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav7d-4Q5R1H9 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7d-4Q5R1H9 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Trav7d-4Q5R1H9 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7d-4Q5R1H9 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7d-4Q5R1H9 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7d-4Q5R1H9 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC12.07□□□□□ -0.48
Trav7d-4Q5R1H9 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7d-4Q5R1H9 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7d-4Q5R1H9 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7d-4Q5R1H9 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav7d-4Q5R1H9 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7d-4Q5R1H9 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC12.07□□□□□ -0.48
Trav7d-4Q5R1H9 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7d-4Q5R1H9 Gm37292-201ENSMUST00000192062 758 ntBASIC12.07□□□□□ -0.48
Trav7d-4Q5R1H9 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7d-4Q5R1H9 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Trav7d-4Q5R1H9 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC12.07□□□□□ -0.48
Trav7d-4Q5R1H9 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7d-4Q5R1H9 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Trav7d-4Q5R1H9 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7d-4Q5R1H9 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7d-4Q5R1H9 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Trav7d-4Q5R1H9 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav7d-4Q5R1H9 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7d-4Q5R1H9 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7d-4Q5R1H9 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7d-4Q5R1H9 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7d-4Q5R1H9 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7d-4Q5R1H9 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7d-4Q5R1H9 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7d-4Q5R1H9 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7d-4Q5R1H9 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Trav7d-4Q5R1H9 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7d-4Q5R1H9 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trav7d-4Q5R1H9 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7d-4Q5R1H9 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7d-4Q5R1H9 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7d-4Q5R1H9 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7d-4Q5R1H9 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Trav7d-4Q5R1H9 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7d-4Q5R1H9 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav7d-4Q5R1H9 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7d-4Q5R1H9 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav7d-4Q5R1H9 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7d-4Q5R1H9 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7d-4Q5R1H9 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7d-4Q5R1H9 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7d-4Q5R1H9 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7d-4Q5R1H9 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7d-4Q5R1H9 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7d-4Q5R1H9 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7d-4Q5R1H9 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7d-4Q5R1H9 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Trav7d-4Q5R1H9 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7d-4Q5R1H9 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7d-4Q5R1H9 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7d-4Q5R1H9 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7d-4Q5R1H9 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7d-4Q5R1H9 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7d-4Q5R1H9 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7d-4Q5R1H9 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7d-4Q5R1H9 Slc35b2-202ENSMUST00000223987 1766 ntBASIC12.05□□□□□ -0.48
Trav7d-4Q5R1H9 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7d-4Q5R1H9 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Trav7d-4Q5R1H9 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav7d-4Q5R1H9 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7d-4Q5R1H9 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7d-4Q5R1H9 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav7d-4Q5R1H9 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7d-4Q5R1H9 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7d-4Q5R1H9 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7d-4Q5R1H9 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7d-4Q5R1H9 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.05□□□□□ -0.48
Trav7d-4Q5R1H9 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7d-4Q5R1H9 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav7d-4Q5R1H9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7d-4Q5R1H9 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7d-4Q5R1H9 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7d-4Q5R1H9 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7d-4Q5R1H9 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Trav7d-4Q5R1H9 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7d-4Q5R1H9 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.05□□□□□ -0.48
Trav7d-4Q5R1H9 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav7d-4Q5R1H9 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav7d-4Q5R1H9 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav7d-4Q5R1H9 Gm21596-201ENSMUST00000178049 1316 ntBASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms