Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.31□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.31□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC12.3□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC12.3□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Gm29707-201ENSMUST00000196325 491 ntBASIC12.3□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.3□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.29□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC12.29□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC12.29□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 AC156016.1-201ENSMUST00000227190 1035 ntBASIC12.29□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Odf3b-204ENSMUST00000227834 930 ntBASIC12.29□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.29□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.28□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms