Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Shank3Q4ACU6 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Shank3Q4ACU6 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Shank3Q4ACU6 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC19.46■□□□□ 0.71
Shank3Q4ACU6 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Shank3Q4ACU6 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Shank3Q4ACU6 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Shank3Q4ACU6 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC19.46■□□□□ 0.71
Shank3Q4ACU6 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Shank3Q4ACU6 Gm28630-201ENSMUST00000187806 498 ntBASIC19.46■□□□□ 0.71
Shank3Q4ACU6 Gm2272-201ENSMUST00000194903 582 ntBASIC19.46■□□□□ 0.71
Shank3Q4ACU6 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Shank3Q4ACU6 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Shank3Q4ACU6 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Shank3Q4ACU6 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC19.46■□□□□ 0.71
Shank3Q4ACU6 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Shank3Q4ACU6 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Shank3Q4ACU6 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Shank3Q4ACU6 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Shank3Q4ACU6 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Shank3Q4ACU6 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shank3Q4ACU6 Gm27306-201ENSMUST00000183970 107 ntBASIC19.45■□□□□ 0.7
Shank3Q4ACU6 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Shank3Q4ACU6 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shank3Q4ACU6 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Shank3Q4ACU6 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Shank3Q4ACU6 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Shank3Q4ACU6 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shank3Q4ACU6 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shank3Q4ACU6 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shank3Q4ACU6 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.45■□□□□ 0.7
Shank3Q4ACU6 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
Shank3Q4ACU6 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shank3Q4ACU6 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shank3Q4ACU6 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Shank3Q4ACU6 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC19.45■□□□□ 0.7
Shank3Q4ACU6 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC19.45■□□□□ 0.7
Shank3Q4ACU6 Gm7653-201ENSMUST00000214567 508 ntBASIC19.45■□□□□ 0.7
Shank3Q4ACU6 AC130829.1-201ENSMUST00000221548 494 ntBASIC19.45■□□□□ 0.7
Shank3Q4ACU6 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shank3Q4ACU6 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shank3Q4ACU6 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shank3Q4ACU6 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Shank3Q4ACU6 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shank3Q4ACU6 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shank3Q4ACU6 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shank3Q4ACU6 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Shank3Q4ACU6 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Shank3Q4ACU6 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Shank3Q4ACU6 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Shank3Q4ACU6 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shank3Q4ACU6 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Shank3Q4ACU6 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shank3Q4ACU6 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shank3Q4ACU6 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC19.44■□□□□ 0.7
Shank3Q4ACU6 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Shank3Q4ACU6 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC19.44■□□□□ 0.7
Shank3Q4ACU6 Gm27430-201ENSMUST00000184585 107 ntBASIC19.44■□□□□ 0.7
Shank3Q4ACU6 Gm44333-201ENSMUST00000197168 107 ntBASIC19.44■□□□□ 0.7
Shank3Q4ACU6 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shank3Q4ACU6 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC19.44■□□□□ 0.7
Shank3Q4ACU6 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shank3Q4ACU6 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Shank3Q4ACU6 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Shank3Q4ACU6 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shank3Q4ACU6 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Shank3Q4ACU6 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shank3Q4ACU6 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shank3Q4ACU6 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Shank3Q4ACU6 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Shank3Q4ACU6 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shank3Q4ACU6 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shank3Q4ACU6 Gm27680-201ENSMUST00000184192 160 ntBASIC19.43■□□□□ 0.7
Shank3Q4ACU6 Gm6473-201ENSMUST00000188572 1210 ntBASIC19.43■□□□□ 0.7
Shank3Q4ACU6 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Shank3Q4ACU6 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Shank3Q4ACU6 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shank3Q4ACU6 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Shank3Q4ACU6 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Shank3Q4ACU6 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shank3Q4ACU6 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Shank3Q4ACU6 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shank3Q4ACU6 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shank3Q4ACU6 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shank3Q4ACU6 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Shank3Q4ACU6 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shank3Q4ACU6 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Shank3Q4ACU6 Gm17837-201ENSMUST00000186435 985 ntBASIC19.42■□□□□ 0.7
Shank3Q4ACU6 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC19.42■□□□□ 0.7
Shank3Q4ACU6 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shank3Q4ACU6 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shank3Q4ACU6 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shank3Q4ACU6 Gm13337-201ENSMUST00000119183 1594 ntBASIC19.42■□□□□ 0.7
Shank3Q4ACU6 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Shank3Q4ACU6 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shank3Q4ACU6 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shank3Q4ACU6 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shank3Q4ACU6 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
Shank3Q4ACU6 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Shank3Q4ACU6 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms