Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Mir449b-201ENSMUST00000104833 80 ntBASIC23.03■■□□□ 1.28
Arhgef40Q3UPH7 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Arhgef40Q3UPH7 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Arhgef40Q3UPH7 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC23.03■■□□□ 1.28
Arhgef40Q3UPH7 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Arhgef40Q3UPH7 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Arhgef40Q3UPH7 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC23.03■■□□□ 1.28
Arhgef40Q3UPH7 CT030684.1-201ENSMUST00000227292 914 ntBASIC23.03■■□□□ 1.28
Arhgef40Q3UPH7 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Arhgef40Q3UPH7 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
Arhgef40Q3UPH7 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Arhgef40Q3UPH7 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Arhgef40Q3UPH7 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Arhgef40Q3UPH7 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Arhgef40Q3UPH7 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
Arhgef40Q3UPH7 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Arhgef40Q3UPH7 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Arhgef40Q3UPH7 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Arhgef40Q3UPH7 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Arhgef40Q3UPH7 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Arhgef40Q3UPH7 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Arhgef40Q3UPH7 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Arhgef40Q3UPH7 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Arhgef40Q3UPH7 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Arhgef40Q3UPH7 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.27
Arhgef40Q3UPH7 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Arhgef40Q3UPH7 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Arhgef40Q3UPH7 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Arhgef40Q3UPH7 Gm13410-201ENSMUST00000117058 1415 ntBASIC23.01■■□□□ 1.27
Arhgef40Q3UPH7 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Arhgef40Q3UPH7 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
Arhgef40Q3UPH7 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Arhgef40Q3UPH7 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Arhgef40Q3UPH7 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Arhgef40Q3UPH7 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Arhgef40Q3UPH7 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC23.01■■□□□ 1.27
Arhgef40Q3UPH7 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Arhgef40Q3UPH7 AC140397.2-201ENSMUST00000224213 834 ntBASIC23.01■■□□□ 1.27
Arhgef40Q3UPH7 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Arhgef40Q3UPH7 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Arhgef40Q3UPH7 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Arhgef40Q3UPH7 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Arhgef40Q3UPH7 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Arhgef40Q3UPH7 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Arhgef40Q3UPH7 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC23■■□□□ 1.27
Arhgef40Q3UPH7 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Arhgef40Q3UPH7 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Arhgef40Q3UPH7 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Arhgef40Q3UPH7 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC23■■□□□ 1.27
Arhgef40Q3UPH7 Fgf17-202ENSMUST00000227123 1336 ntBASIC23■■□□□ 1.27
Arhgef40Q3UPH7 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC23■■□□□ 1.27
Arhgef40Q3UPH7 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC23■■□□□ 1.27
Arhgef40Q3UPH7 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Arhgef40Q3UPH7 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
Arhgef40Q3UPH7 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Arhgef40Q3UPH7 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Arhgef40Q3UPH7 Gm11424-201ENSMUST00000121929 829 ntBASIC23■■□□□ 1.27
Arhgef40Q3UPH7 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC23■■□□□ 1.27
Arhgef40Q3UPH7 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC23■■□□□ 1.27
Arhgef40Q3UPH7 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Arhgef40Q3UPH7 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Arhgef40Q3UPH7 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Arhgef40Q3UPH7 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Arhgef40Q3UPH7 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC23■■□□□ 1.27
Arhgef40Q3UPH7 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Arhgef40Q3UPH7 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC23■■□□□ 1.27
Arhgef40Q3UPH7 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Arhgef40Q3UPH7 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Arhgef40Q3UPH7 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Arhgef40Q3UPH7 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC22.99■■□□□ 1.27
Arhgef40Q3UPH7 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Arhgef40Q3UPH7 Gm43767-201ENSMUST00000198933 381 ntBASIC22.99■■□□□ 1.27
Arhgef40Q3UPH7 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC22.99■■□□□ 1.27
Arhgef40Q3UPH7 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Arhgef40Q3UPH7 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Arhgef40Q3UPH7 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Arhgef40Q3UPH7 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Arhgef40Q3UPH7 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Arhgef40Q3UPH7 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Arhgef40Q3UPH7 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC22.99■■□□□ 1.27
Arhgef40Q3UPH7 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Arhgef40Q3UPH7 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Arhgef40Q3UPH7 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Arhgef40Q3UPH7 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Arhgef40Q3UPH7 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Arhgef40Q3UPH7 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC22.98■■□□□ 1.27
Arhgef40Q3UPH7 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC22.98■■□□□ 1.27
Arhgef40Q3UPH7 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC22.98■■□□□ 1.27
Arhgef40Q3UPH7 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC22.98■■□□□ 1.27
Arhgef40Q3UPH7 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC22.98■■□□□ 1.27
Arhgef40Q3UPH7 Gm10154-201ENSMUST00000084445 354 ntBASIC22.98■■□□□ 1.27
Arhgef40Q3UPH7 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
Arhgef40Q3UPH7 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
Arhgef40Q3UPH7 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
Arhgef40Q3UPH7 Gm6018-201ENSMUST00000216090 1306 ntBASIC22.98■■□□□ 1.27
Arhgef40Q3UPH7 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Arhgef40Q3UPH7 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Arhgef40Q3UPH7 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Arhgef40Q3UPH7 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
Arhgef40Q3UPH7 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms