Protein–RNA interactions for Protein: Q3UN04

Usp30, Ubiquitin carboxyl-terminal hydrolase 30, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp30Q3UN04 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.83■□□□□ 0.12
Usp30Q3UN04 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.83■□□□□ 0.12
Usp30Q3UN04 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp30Q3UN04 Gm24513-201ENSMUST00000174964 138 ntBASIC15.83■□□□□ 0.12
Usp30Q3UN04 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.83■□□□□ 0.12
Usp30Q3UN04 Gm45167-201ENSMUST00000208007 322 ntBASIC15.83■□□□□ 0.12
Usp30Q3UN04 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.83■□□□□ 0.12
Usp30Q3UN04 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.83■□□□□ 0.12
Usp30Q3UN04 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp30Q3UN04 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp30Q3UN04 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp30Q3UN04 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Usp30Q3UN04 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp30Q3UN04 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Usp30Q3UN04 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp30Q3UN04 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp30Q3UN04 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Usp30Q3UN04 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp30Q3UN04 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Usp30Q3UN04 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Usp30Q3UN04 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Usp30Q3UN04 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp30Q3UN04 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp30Q3UN04 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp30Q3UN04 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp30Q3UN04 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp30Q3UN04 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp30Q3UN04 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp30Q3UN04 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Usp30Q3UN04 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.82■□□□□ 0.12
Usp30Q3UN04 Gm18489-201ENSMUST00000172565 551 ntBASIC15.82■□□□□ 0.12
Usp30Q3UN04 Mir3113-201ENSMUST00000175478 76 ntBASIC15.82■□□□□ 0.12
Usp30Q3UN04 Gm27397-201ENSMUST00000184997 107 ntBASIC15.82■□□□□ 0.12
Usp30Q3UN04 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC15.82■□□□□ 0.12
Usp30Q3UN04 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Usp30Q3UN04 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp30Q3UN04 Gm10175-201ENSMUST00000086013 645 ntBASIC15.82■□□□□ 0.12
Usp30Q3UN04 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Usp30Q3UN04 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp30Q3UN04 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp30Q3UN04 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.82■□□□□ 0.12
Usp30Q3UN04 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp30Q3UN04 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp30Q3UN04 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp30Q3UN04 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp30Q3UN04 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp30Q3UN04 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp30Q3UN04 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Usp30Q3UN04 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Usp30Q3UN04 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp30Q3UN04 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp30Q3UN04 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp30Q3UN04 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Usp30Q3UN04 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.81■□□□□ 0.12
Usp30Q3UN04 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp30Q3UN04 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp30Q3UN04 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Usp30Q3UN04 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.81■□□□□ 0.12
Usp30Q3UN04 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Usp30Q3UN04 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.81■□□□□ 0.12
Usp30Q3UN04 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Usp30Q3UN04 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.81■□□□□ 0.12
Usp30Q3UN04 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Usp30Q3UN04 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp30Q3UN04 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp30Q3UN04 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Usp30Q3UN04 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.81■□□□□ 0.12
Usp30Q3UN04 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Usp30Q3UN04 Gm7787-201ENSMUST00000216858 688 ntBASIC15.81■□□□□ 0.12
Usp30Q3UN04 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Usp30Q3UN04 Ndufaf2-202ENSMUST00000223734 556 ntBASIC15.81■□□□□ 0.12
Usp30Q3UN04 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp30Q3UN04 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp30Q3UN04 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp30Q3UN04 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp30Q3UN04 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp30Q3UN04 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp30Q3UN04 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp30Q3UN04 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp30Q3UN04 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.81■□□□□ 0.12
Usp30Q3UN04 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp30Q3UN04 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp30Q3UN04 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp30Q3UN04 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Usp30Q3UN04 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Usp30Q3UN04 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp30Q3UN04 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp30Q3UN04 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Usp30Q3UN04 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp30Q3UN04 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp30Q3UN04 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Usp30Q3UN04 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp30Q3UN04 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp30Q3UN04 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp30Q3UN04 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Usp30Q3UN04 Gm4995-201ENSMUST00000117247 432 ntBASIC15.8■□□□□ 0.12
Usp30Q3UN04 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Usp30Q3UN04 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Usp30Q3UN04 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp30Q3UN04 Gm43575-201ENSMUST00000196420 516 ntBASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms