Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col5a2Q3U962 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.6■□□□□ 0.57
Col5a2Q3U962 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Col5a2Q3U962 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Col5a2Q3U962 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Col5a2Q3U962 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col5a2Q3U962 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.6■□□□□ 0.57
Col5a2Q3U962 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col5a2Q3U962 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Col5a2Q3U962 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
Col5a2Q3U962 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC18.59■□□□□ 0.57
Col5a2Q3U962 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Col5a2Q3U962 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Col5a2Q3U962 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC18.59■□□□□ 0.57
Col5a2Q3U962 Gm29541-201ENSMUST00000191351 678 ntBASIC18.59■□□□□ 0.57
Col5a2Q3U962 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC18.59■□□□□ 0.57
Col5a2Q3U962 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col5a2Q3U962 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Col5a2Q3U962 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
Col5a2Q3U962 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col5a2Q3U962 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col5a2Q3U962 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col5a2Q3U962 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC18.59■□□□□ 0.57
Col5a2Q3U962 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.59■□□□□ 0.57
Col5a2Q3U962 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Col5a2Q3U962 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col5a2Q3U962 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col5a2Q3U962 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Col5a2Q3U962 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col5a2Q3U962 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col5a2Q3U962 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col5a2Q3U962 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC18.58■□□□□ 0.57
Col5a2Q3U962 AC130829.1-201ENSMUST00000221548 494 ntBASIC18.58■□□□□ 0.57
Col5a2Q3U962 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col5a2Q3U962 AC025913.2-201ENSMUST00000220136 1766 ntBASIC18.58■□□□□ 0.57
Col5a2Q3U962 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col5a2Q3U962 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Col5a2Q3U962 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC18.58■□□□□ 0.57
Col5a2Q3U962 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col5a2Q3U962 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col5a2Q3U962 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Col5a2Q3U962 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.56
Col5a2Q3U962 Gm6415-201ENSMUST00000118488 348 ntBASIC18.58■□□□□ 0.56
Col5a2Q3U962 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC18.58■□□□□ 0.56
Col5a2Q3U962 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC18.58■□□□□ 0.56
Col5a2Q3U962 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC18.58■□□□□ 0.56
Col5a2Q3U962 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col5a2Q3U962 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC18.58■□□□□ 0.56
Col5a2Q3U962 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col5a2Q3U962 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col5a2Q3U962 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col5a2Q3U962 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col5a2Q3U962 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Col5a2Q3U962 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col5a2Q3U962 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Col5a2Q3U962 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.57■□□□□ 0.56
Col5a2Q3U962 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col5a2Q3U962 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Col5a2Q3U962 Gm7488-201ENSMUST00000117148 684 ntBASIC18.57■□□□□ 0.56
Col5a2Q3U962 Gm13453-201ENSMUST00000118708 357 ntBASIC18.57■□□□□ 0.56
Col5a2Q3U962 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC18.57■□□□□ 0.56
Col5a2Q3U962 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC18.57■□□□□ 0.56
Col5a2Q3U962 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Col5a2Q3U962 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC18.57■□□□□ 0.56
Col5a2Q3U962 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col5a2Q3U962 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col5a2Q3U962 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Col5a2Q3U962 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col5a2Q3U962 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col5a2Q3U962 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Col5a2Q3U962 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Col5a2Q3U962 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col5a2Q3U962 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col5a2Q3U962 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Col5a2Q3U962 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col5a2Q3U962 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col5a2Q3U962 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Col5a2Q3U962 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col5a2Q3U962 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col5a2Q3U962 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col5a2Q3U962 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col5a2Q3U962 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Col5a2Q3U962 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Col5a2Q3U962 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Col5a2Q3U962 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC18.56■□□□□ 0.56
Col5a2Q3U962 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Col5a2Q3U962 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Col5a2Q3U962 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC18.56■□□□□ 0.56
Col5a2Q3U962 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col5a2Q3U962 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col5a2Q3U962 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col5a2Q3U962 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col5a2Q3U962 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col5a2Q3U962 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC18.55■□□□□ 0.56
Col5a2Q3U962 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Col5a2Q3U962 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col5a2Q3U962 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col5a2Q3U962 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Col5a2Q3U962 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col5a2Q3U962 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms