Protein–RNA interactions for Protein: Q3U1D0

Lins1, Protein Lines homolog 1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lins1Q3U1D0 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lins1Q3U1D0 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Lins1Q3U1D0 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Lins1Q3U1D0 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC18.74■□□□□ 0.59
Lins1Q3U1D0 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lins1Q3U1D0 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lins1Q3U1D0 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Lins1Q3U1D0 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Lins1Q3U1D0 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Lins1Q3U1D0 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lins1Q3U1D0 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC18.74■□□□□ 0.59
Lins1Q3U1D0 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Lins1Q3U1D0 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC18.74■□□□□ 0.59
Lins1Q3U1D0 Gm2756-201ENSMUST00000195851 400 ntBASIC18.74■□□□□ 0.59
Lins1Q3U1D0 Gm43575-201ENSMUST00000196420 516 ntBASIC18.74■□□□□ 0.59
Lins1Q3U1D0 Gm45683-201ENSMUST00000210825 1247 ntBASIC18.74■□□□□ 0.59
Lins1Q3U1D0 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lins1Q3U1D0 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Lins1Q3U1D0 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
Lins1Q3U1D0 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Lins1Q3U1D0 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lins1Q3U1D0 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Lins1Q3U1D0 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.74■□□□□ 0.59
Lins1Q3U1D0 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lins1Q3U1D0 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lins1Q3U1D0 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lins1Q3U1D0 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.73■□□□□ 0.59
Lins1Q3U1D0 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lins1Q3U1D0 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.73■□□□□ 0.59
Lins1Q3U1D0 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lins1Q3U1D0 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Lins1Q3U1D0 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lins1Q3U1D0 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lins1Q3U1D0 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Lins1Q3U1D0 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lins1Q3U1D0 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Lins1Q3U1D0 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC18.73■□□□□ 0.59
Lins1Q3U1D0 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC18.73■□□□□ 0.59
Lins1Q3U1D0 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC18.73■□□□□ 0.59
Lins1Q3U1D0 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Lins1Q3U1D0 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC18.73■□□□□ 0.59
Lins1Q3U1D0 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lins1Q3U1D0 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Lins1Q3U1D0 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lins1Q3U1D0 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lins1Q3U1D0 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lins1Q3U1D0 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Lins1Q3U1D0 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lins1Q3U1D0 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lins1Q3U1D0 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lins1Q3U1D0 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
Lins1Q3U1D0 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lins1Q3U1D0 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.72■□□□□ 0.59
Lins1Q3U1D0 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lins1Q3U1D0 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC18.72■□□□□ 0.59
Lins1Q3U1D0 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC18.72■□□□□ 0.59
Lins1Q3U1D0 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC18.72■□□□□ 0.59
Lins1Q3U1D0 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lins1Q3U1D0 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lins1Q3U1D0 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lins1Q3U1D0 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lins1Q3U1D0 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lins1Q3U1D0 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Lins1Q3U1D0 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lins1Q3U1D0 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Lins1Q3U1D0 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Lins1Q3U1D0 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.71■□□□□ 0.59
Lins1Q3U1D0 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Lins1Q3U1D0 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
Lins1Q3U1D0 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lins1Q3U1D0 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lins1Q3U1D0 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC18.71■□□□□ 0.59
Lins1Q3U1D0 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.71■□□□□ 0.59
Lins1Q3U1D0 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.71■□□□□ 0.59
Lins1Q3U1D0 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.71■□□□□ 0.59
Lins1Q3U1D0 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lins1Q3U1D0 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lins1Q3U1D0 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Lins1Q3U1D0 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC18.71■□□□□ 0.59
Lins1Q3U1D0 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lins1Q3U1D0 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lins1Q3U1D0 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lins1Q3U1D0 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lins1Q3U1D0 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lins1Q3U1D0 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Lins1Q3U1D0 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lins1Q3U1D0 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lins1Q3U1D0 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lins1Q3U1D0 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lins1Q3U1D0 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Lins1Q3U1D0 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lins1Q3U1D0 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lins1Q3U1D0 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lins1Q3U1D0 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Lins1Q3U1D0 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC18.7■□□□□ 0.58
Lins1Q3U1D0 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.7■□□□□ 0.58
Lins1Q3U1D0 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lins1Q3U1D0 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lins1Q3U1D0 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lins1Q3U1D0 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms