Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccbe1Q3MI99 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccbe1Q3MI99 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccbe1Q3MI99 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Ccbe1Q3MI99 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccbe1Q3MI99 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.31□□□□□ -0.12
Ccbe1Q3MI99 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccbe1Q3MI99 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccbe1Q3MI99 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccbe1Q3MI99 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccbe1Q3MI99 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccbe1Q3MI99 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccbe1Q3MI99 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccbe1Q3MI99 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccbe1Q3MI99 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccbe1Q3MI99 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.3□□□□□ -0.12
Ccbe1Q3MI99 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.3□□□□□ -0.12
Ccbe1Q3MI99 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccbe1Q3MI99 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccbe1Q3MI99 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ccbe1Q3MI99 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccbe1Q3MI99 Gm12134-201ENSMUST00000122109 520 ntBASIC14.3□□□□□ -0.12
Ccbe1Q3MI99 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccbe1Q3MI99 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ccbe1Q3MI99 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.3□□□□□ -0.12
Ccbe1Q3MI99 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccbe1Q3MI99 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Ccbe1Q3MI99 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccbe1Q3MI99 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Ccbe1Q3MI99 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.3□□□□□ -0.12
Ccbe1Q3MI99 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccbe1Q3MI99 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccbe1Q3MI99 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccbe1Q3MI99 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccbe1Q3MI99 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccbe1Q3MI99 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccbe1Q3MI99 Gm38273-201ENSMUST00000194987 2382 ntBASIC14.3□□□□□ -0.12
Ccbe1Q3MI99 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccbe1Q3MI99 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccbe1Q3MI99 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccbe1Q3MI99 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccbe1Q3MI99 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ccbe1Q3MI99 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Ccbe1Q3MI99 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccbe1Q3MI99 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ccbe1Q3MI99 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccbe1Q3MI99 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ccbe1Q3MI99 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccbe1Q3MI99 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccbe1Q3MI99 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccbe1Q3MI99 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccbe1Q3MI99 Gm8520-201ENSMUST00000186517 868 ntBASIC14.29□□□□□ -0.12
Ccbe1Q3MI99 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccbe1Q3MI99 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccbe1Q3MI99 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccbe1Q3MI99 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccbe1Q3MI99 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ccbe1Q3MI99 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccbe1Q3MI99 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccbe1Q3MI99 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccbe1Q3MI99 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccbe1Q3MI99 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccbe1Q3MI99 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccbe1Q3MI99 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccbe1Q3MI99 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccbe1Q3MI99 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccbe1Q3MI99 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccbe1Q3MI99 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccbe1Q3MI99 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccbe1Q3MI99 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.28□□□□□ -0.12
Ccbe1Q3MI99 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccbe1Q3MI99 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC14.28□□□□□ -0.12
Ccbe1Q3MI99 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccbe1Q3MI99 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccbe1Q3MI99 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.28□□□□□ -0.12
Ccbe1Q3MI99 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ccbe1Q3MI99 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.28□□□□□ -0.12
Ccbe1Q3MI99 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccbe1Q3MI99 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.28□□□□□ -0.12
Ccbe1Q3MI99 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccbe1Q3MI99 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccbe1Q3MI99 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC14.28□□□□□ -0.12
Ccbe1Q3MI99 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Ccbe1Q3MI99 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccbe1Q3MI99 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccbe1Q3MI99 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccbe1Q3MI99 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccbe1Q3MI99 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccbe1Q3MI99 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.28□□□□□ -0.12
Ccbe1Q3MI99 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccbe1Q3MI99 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Ccbe1Q3MI99 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccbe1Q3MI99 Rab3c-202ENSMUST00000223922 2398 ntBASIC14.27□□□□□ -0.12
Ccbe1Q3MI99 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccbe1Q3MI99 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ccbe1Q3MI99 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ccbe1Q3MI99 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Ccbe1Q3MI99 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccbe1Q3MI99 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ccbe1Q3MI99 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms