Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pkd1l3Q2EG98 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pkd1l3Q2EG98 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pkd1l3Q2EG98 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pkd1l3Q2EG98 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pkd1l3Q2EG98 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pkd1l3Q2EG98 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pkd1l3Q2EG98 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pkd1l3Q2EG98 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pkd1l3Q2EG98 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pkd1l3Q2EG98 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pkd1l3Q2EG98 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Pkd1l3Q2EG98 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pkd1l3Q2EG98 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pkd1l3Q2EG98 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pkd1l3Q2EG98 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pkd1l3Q2EG98 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pkd1l3Q2EG98 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.13□□□□□ -0.15
Pkd1l3Q2EG98 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pkd1l3Q2EG98 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pkd1l3Q2EG98 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pkd1l3Q2EG98 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Pkd1l3Q2EG98 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pkd1l3Q2EG98 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pkd1l3Q2EG98 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pkd1l3Q2EG98 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.13□□□□□ -0.15
Pkd1l3Q2EG98 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.13□□□□□ -0.15
Pkd1l3Q2EG98 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pkd1l3Q2EG98 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pkd1l3Q2EG98 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.13□□□□□ -0.15
Pkd1l3Q2EG98 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pkd1l3Q2EG98 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pkd1l3Q2EG98 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pkd1l3Q2EG98 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Pkd1l3Q2EG98 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pkd1l3Q2EG98 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.13□□□□□ -0.15
Pkd1l3Q2EG98 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pkd1l3Q2EG98 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pkd1l3Q2EG98 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Pkd1l3Q2EG98 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pkd1l3Q2EG98 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pkd1l3Q2EG98 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pkd1l3Q2EG98 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Pkd1l3Q2EG98 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Pkd1l3Q2EG98 Gm2756-201ENSMUST00000195851 400 ntBASIC14.13□□□□□ -0.15
Pkd1l3Q2EG98 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pkd1l3Q2EG98 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Pkd1l3Q2EG98 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.12□□□□□ -0.15
Pkd1l3Q2EG98 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pkd1l3Q2EG98 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pkd1l3Q2EG98 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pkd1l3Q2EG98 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pkd1l3Q2EG98 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pkd1l3Q2EG98 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pkd1l3Q2EG98 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.12□□□□□ -0.15
Pkd1l3Q2EG98 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.12□□□□□ -0.15
Pkd1l3Q2EG98 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pkd1l3Q2EG98 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Pkd1l3Q2EG98 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pkd1l3Q2EG98 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pkd1l3Q2EG98 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pkd1l3Q2EG98 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pkd1l3Q2EG98 Gm25911-201ENSMUST00000157621 56 ntBASIC14.12□□□□□ -0.15
Pkd1l3Q2EG98 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.12□□□□□ -0.15
Pkd1l3Q2EG98 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.12□□□□□ -0.15
Pkd1l3Q2EG98 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pkd1l3Q2EG98 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pkd1l3Q2EG98 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pkd1l3Q2EG98 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.12□□□□□ -0.15
Pkd1l3Q2EG98 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pkd1l3Q2EG98 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pkd1l3Q2EG98 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pkd1l3Q2EG98 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pkd1l3Q2EG98 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pkd1l3Q2EG98 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
Pkd1l3Q2EG98 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Pkd1l3Q2EG98 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pkd1l3Q2EG98 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pkd1l3Q2EG98 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Pkd1l3Q2EG98 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pkd1l3Q2EG98 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pkd1l3Q2EG98 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Pkd1l3Q2EG98 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.11□□□□□ -0.15
Pkd1l3Q2EG98 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pkd1l3Q2EG98 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.11□□□□□ -0.15
Pkd1l3Q2EG98 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pkd1l3Q2EG98 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pkd1l3Q2EG98 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pkd1l3Q2EG98 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pkd1l3Q2EG98 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Pkd1l3Q2EG98 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.11□□□□□ -0.15
Pkd1l3Q2EG98 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pkd1l3Q2EG98 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Pkd1l3Q2EG98 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pkd1l3Q2EG98 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pkd1l3Q2EG98 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pkd1l3Q2EG98 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.11□□□□□ -0.15
Pkd1l3Q2EG98 Gm7222-201ENSMUST00000117512 906 ntBASIC14.11□□□□□ -0.15
Pkd1l3Q2EG98 Gm8000-201ENSMUST00000188378 592 ntBASIC14.11□□□□□ -0.15
Pkd1l3Q2EG98 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms