Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chd8Q09XV5 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chd8Q09XV5 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Chd8Q09XV5 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chd8Q09XV5 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Chd8Q09XV5 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC14.06□□□□□ -0.16
Chd8Q09XV5 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Chd8Q09XV5 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.06□□□□□ -0.16
Chd8Q09XV5 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC14.06□□□□□ -0.16
Chd8Q09XV5 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chd8Q09XV5 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chd8Q09XV5 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chd8Q09XV5 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chd8Q09XV5 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chd8Q09XV5 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.06□□□□□ -0.16
Chd8Q09XV5 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.06□□□□□ -0.16
Chd8Q09XV5 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.06□□□□□ -0.16
Chd8Q09XV5 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC14.06□□□□□ -0.16
Chd8Q09XV5 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Chd8Q09XV5 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chd8Q09XV5 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chd8Q09XV5 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Chd8Q09XV5 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Chd8Q09XV5 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Chd8Q09XV5 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Chd8Q09XV5 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chd8Q09XV5 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chd8Q09XV5 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chd8Q09XV5 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC14.05□□□□□ -0.16
Chd8Q09XV5 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.05□□□□□ -0.16
Chd8Q09XV5 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.05□□□□□ -0.16
Chd8Q09XV5 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chd8Q09XV5 Gm5161-201ENSMUST00000075243 853 ntBASIC14.05□□□□□ -0.16
Chd8Q09XV5 Gm24526-201ENSMUST00000082921 158 ntBASIC14.05□□□□□ -0.16
Chd8Q09XV5 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chd8Q09XV5 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Chd8Q09XV5 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chd8Q09XV5 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.05□□□□□ -0.16
Chd8Q09XV5 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Chd8Q09XV5 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Chd8Q09XV5 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chd8Q09XV5 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.05□□□□□ -0.16
Chd8Q09XV5 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.05□□□□□ -0.16
Chd8Q09XV5 Gm12008-201ENSMUST00000117791 755 ntBASIC14.05□□□□□ -0.16
Chd8Q09XV5 Gm15808-201ENSMUST00000119046 604 ntBASIC14.05□□□□□ -0.16
Chd8Q09XV5 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.05□□□□□ -0.16
Chd8Q09XV5 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Chd8Q09XV5 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chd8Q09XV5 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Chd8Q09XV5 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Chd8Q09XV5 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Chd8Q09XV5 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.05□□□□□ -0.16
Chd8Q09XV5 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.05□□□□□ -0.16
Chd8Q09XV5 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC14.05□□□□□ -0.16
Chd8Q09XV5 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.05□□□□□ -0.16
Chd8Q09XV5 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14.05□□□□□ -0.16
Chd8Q09XV5 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chd8Q09XV5 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chd8Q09XV5 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chd8Q09XV5 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Chd8Q09XV5 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chd8Q09XV5 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Chd8Q09XV5 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.04□□□□□ -0.16
Chd8Q09XV5 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Chd8Q09XV5 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Chd8Q09XV5 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Chd8Q09XV5 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.04□□□□□ -0.16
Chd8Q09XV5 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.04□□□□□ -0.16
Chd8Q09XV5 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC14.04□□□□□ -0.16
Chd8Q09XV5 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Chd8Q09XV5 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC14.04□□□□□ -0.16
Chd8Q09XV5 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Chd8Q09XV5 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chd8Q09XV5 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.04□□□□□ -0.16
Chd8Q09XV5 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.04□□□□□ -0.16
Chd8Q09XV5 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chd8Q09XV5 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chd8Q09XV5 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Chd8Q09XV5 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.04□□□□□ -0.16
Chd8Q09XV5 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Chd8Q09XV5 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.04□□□□□ -0.16
Chd8Q09XV5 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.04□□□□□ -0.16
Chd8Q09XV5 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chd8Q09XV5 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chd8Q09XV5 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Chd8Q09XV5 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Chd8Q09XV5 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chd8Q09XV5 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chd8Q09XV5 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.03□□□□□ -0.16
Chd8Q09XV5 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chd8Q09XV5 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chd8Q09XV5 Gm37917-201ENSMUST00000194711 392 ntBASIC14.03□□□□□ -0.16
Chd8Q09XV5 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chd8Q09XV5 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chd8Q09XV5 Gm35558-201ENSMUST00000222675 2219 ntBASIC14.03□□□□□ -0.16
Chd8Q09XV5 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.03□□□□□ -0.16
Chd8Q09XV5 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chd8Q09XV5 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Chd8Q09XV5 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chd8Q09XV5 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms