Protein–RNA interactions for Protein: Q01149

Col1a2, Collagen alpha-2(I) chain, mousemouse

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2Q01149 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Col1a2Q01149 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col1a2Q01149 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Col1a2Q01149 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col1a2Q01149 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Col1a2Q01149 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col1a2Q01149 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col1a2Q01149 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col1a2Q01149 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col1a2Q01149 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col1a2Q01149 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col1a2Q01149 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col1a2Q01149 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col1a2Q01149 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Col1a2Q01149 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC19.68■□□□□ 0.74
Col1a2Q01149 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col1a2Q01149 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col1a2Q01149 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC19.68■□□□□ 0.74
Col1a2Q01149 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Col1a2Q01149 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col1a2Q01149 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col1a2Q01149 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col1a2Q01149 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC19.67■□□□□ 0.74
Col1a2Q01149 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col1a2Q01149 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Col1a2Q01149 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Col1a2Q01149 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col1a2Q01149 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col1a2Q01149 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col1a2Q01149 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col1a2Q01149 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col1a2Q01149 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Col1a2Q01149 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col1a2Q01149 Gm44492-201ENSMUST00000197012 141 ntBASIC19.67■□□□□ 0.74
Col1a2Q01149 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC19.67■□□□□ 0.74
Col1a2Q01149 Gm45747-201ENSMUST00000212203 999 ntBASIC19.67■□□□□ 0.74
Col1a2Q01149 Gm18246-201ENSMUST00000221023 728 ntBASIC19.67■□□□□ 0.74
Col1a2Q01149 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col1a2Q01149 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col1a2Q01149 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Col1a2Q01149 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col1a2Q01149 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col1a2Q01149 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col1a2Q01149 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col1a2Q01149 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Col1a2Q01149 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col1a2Q01149 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col1a2Q01149 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC19.66■□□□□ 0.74
Col1a2Q01149 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col1a2Q01149 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col1a2Q01149 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Col1a2Q01149 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col1a2Q01149 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col1a2Q01149 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Col1a2Q01149 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Col1a2Q01149 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC19.66■□□□□ 0.74
Col1a2Q01149 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Col1a2Q01149 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Col1a2Q01149 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col1a2Q01149 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Col1a2Q01149 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col1a2Q01149 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Col1a2Q01149 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col1a2Q01149 Gm37166-201ENSMUST00000195473 2474 ntBASIC19.65■□□□□ 0.74
Col1a2Q01149 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Col1a2Q01149 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col1a2Q01149 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col1a2Q01149 Gm11453-201ENSMUST00000117318 1007 ntBASIC19.65■□□□□ 0.74
Col1a2Q01149 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC19.65■□□□□ 0.74
Col1a2Q01149 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col1a2Q01149 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Col1a2Q01149 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC19.65■□□□□ 0.74
Col1a2Q01149 AC151286.1-201ENSMUST00000198489 145 ntBASIC19.65■□□□□ 0.74
Col1a2Q01149 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Col1a2Q01149 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col1a2Q01149 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Col1a2Q01149 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Col1a2Q01149 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col1a2Q01149 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Col1a2Q01149 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Col1a2Q01149 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Col1a2Q01149 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC19.64■□□□□ 0.74
Col1a2Q01149 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Col1a2Q01149 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col1a2Q01149 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col1a2Q01149 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Col1a2Q01149 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Col1a2Q01149 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col1a2Q01149 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col1a2Q01149 Chchd1-203ENSMUST00000224633 557 ntBASIC19.64■□□□□ 0.73
Col1a2Q01149 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col1a2Q01149 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col1a2Q01149 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col1a2Q01149 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC19.64■□□□□ 0.73
Col1a2Q01149 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Col1a2Q01149 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Col1a2Q01149 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Col1a2Q01149 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
Col1a2Q01149 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC19.64■□□□□ 0.73
Col1a2Q01149 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms