Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
H3f3aP84244 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
H3f3aP84244 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H3f3aP84244 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H3f3aP84244 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
H3f3aP84244 Gm27459-201ENSMUST00000184860 107 ntBASIC14.05□□□□□ -0.16
H3f3aP84244 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.05□□□□□ -0.16
H3f3aP84244 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
H3f3aP84244 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H3f3aP84244 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H3f3aP84244 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H3f3aP84244 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
H3f3aP84244 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H3f3aP84244 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
H3f3aP84244 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H3f3aP84244 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H3f3aP84244 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
H3f3aP84244 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.05□□□□□ -0.16
H3f3aP84244 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
H3f3aP84244 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
H3f3aP84244 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
H3f3aP84244 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
H3f3aP84244 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
H3f3aP84244 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
H3f3aP84244 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H3f3aP84244 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H3f3aP84244 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H3f3aP84244 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H3f3aP84244 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
H3f3aP84244 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H3f3aP84244 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H3f3aP84244 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.04□□□□□ -0.16
H3f3aP84244 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.04□□□□□ -0.16
H3f3aP84244 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.04□□□□□ -0.16
H3f3aP84244 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.04□□□□□ -0.16
H3f3aP84244 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.04□□□□□ -0.16
H3f3aP84244 Gm4459-201ENSMUST00000118750 468 ntBASIC14.04□□□□□ -0.16
H3f3aP84244 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.04□□□□□ -0.16
H3f3aP84244 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.04□□□□□ -0.16
H3f3aP84244 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
H3f3aP84244 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.04□□□□□ -0.16
H3f3aP84244 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.04□□□□□ -0.16
H3f3aP84244 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.04□□□□□ -0.16
H3f3aP84244 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.04□□□□□ -0.16
H3f3aP84244 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.04□□□□□ -0.16
H3f3aP84244 Gm8825-201ENSMUST00000182565 998 ntBASIC14.04□□□□□ -0.16
H3f3aP84244 Gm4518-201ENSMUST00000182638 718 ntBASIC14.04□□□□□ -0.16
H3f3aP84244 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.04□□□□□ -0.16
H3f3aP84244 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.04□□□□□ -0.16
H3f3aP84244 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.04□□□□□ -0.16
H3f3aP84244 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.04□□□□□ -0.16
H3f3aP84244 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.04□□□□□ -0.16
H3f3aP84244 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.04□□□□□ -0.16
H3f3aP84244 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.04□□□□□ -0.16
H3f3aP84244 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H3f3aP84244 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H3f3aP84244 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.04□□□□□ -0.16
H3f3aP84244 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.04□□□□□ -0.16
H3f3aP84244 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H3f3aP84244 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.04□□□□□ -0.16
H3f3aP84244 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H3f3aP84244 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
H3f3aP84244 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.04□□□□□ -0.16
H3f3aP84244 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H3f3aP84244 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.04□□□□□ -0.16
H3f3aP84244 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H3f3aP84244 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H3f3aP84244 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
H3f3aP84244 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3f3aP84244 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3f3aP84244 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3f3aP84244 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3f3aP84244 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
H3f3aP84244 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
H3f3aP84244 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
H3f3aP84244 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3f3aP84244 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3f3aP84244 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3f3aP84244 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3f3aP84244 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3f3aP84244 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3f3aP84244 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3f3aP84244 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3f3aP84244 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.03□□□□□ -0.16
H3f3aP84244 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3f3aP84244 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3f3aP84244 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3f3aP84244 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3f3aP84244 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
H3f3aP84244 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
H3f3aP84244 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
H3f3aP84244 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
H3f3aP84244 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
H3f3aP84244 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
H3f3aP84244 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
H3f3aP84244 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
H3f3aP84244 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
H3f3aP84244 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
H3f3aP84244 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.02□□□□□ -0.16
H3f3aP84244 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms