Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.97■□□□□ 0.15
ThraP63058 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.97■□□□□ 0.15
ThraP63058 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.97■□□□□ 0.15
ThraP63058 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ThraP63058 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ThraP63058 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ThraP63058 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ThraP63058 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.97■□□□□ 0.15
ThraP63058 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ThraP63058 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ThraP63058 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.97■□□□□ 0.15
ThraP63058 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.97■□□□□ 0.15
ThraP63058 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
ThraP63058 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ThraP63058 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.97■□□□□ 0.15
ThraP63058 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ThraP63058 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ThraP63058 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
ThraP63058 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ThraP63058 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.96■□□□□ 0.15
ThraP63058 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.96■□□□□ 0.15
ThraP63058 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ThraP63058 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ThraP63058 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ThraP63058 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
ThraP63058 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.96■□□□□ 0.15
ThraP63058 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ThraP63058 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ThraP63058 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
ThraP63058 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
ThraP63058 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
ThraP63058 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
ThraP63058 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
ThraP63058 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ThraP63058 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ThraP63058 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ThraP63058 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
ThraP63058 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
ThraP63058 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
ThraP63058 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
ThraP63058 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
ThraP63058 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
ThraP63058 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
ThraP63058 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ThraP63058 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
ThraP63058 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ThraP63058 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ThraP63058 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
ThraP63058 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.95■□□□□ 0.14
ThraP63058 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.95■□□□□ 0.14
ThraP63058 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
ThraP63058 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
ThraP63058 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.95■□□□□ 0.14
ThraP63058 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ThraP63058 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
ThraP63058 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
ThraP63058 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
ThraP63058 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.95■□□□□ 0.14
ThraP63058 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ThraP63058 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
ThraP63058 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ThraP63058 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ThraP63058 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ThraP63058 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
ThraP63058 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
ThraP63058 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.95■□□□□ 0.14
ThraP63058 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ThraP63058 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
ThraP63058 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ThraP63058 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ThraP63058 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ThraP63058 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
ThraP63058 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
ThraP63058 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.94■□□□□ 0.14
ThraP63058 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ThraP63058 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
ThraP63058 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.94■□□□□ 0.14
ThraP63058 Gm13312-201ENSMUST00000119631 718 ntBASIC15.94■□□□□ 0.14
ThraP63058 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.94■□□□□ 0.14
ThraP63058 Gm10052-201ENSMUST00000168019 960 ntBASIC15.94■□□□□ 0.14
ThraP63058 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.94■□□□□ 0.14
ThraP63058 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.94■□□□□ 0.14
ThraP63058 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.94■□□□□ 0.14
ThraP63058 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.94■□□□□ 0.14
ThraP63058 Gm7729-201ENSMUST00000050143 801 ntBASIC15.94■□□□□ 0.14
ThraP63058 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ThraP63058 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ThraP63058 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ThraP63058 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
ThraP63058 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
ThraP63058 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
ThraP63058 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
ThraP63058 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
ThraP63058 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ThraP63058 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ThraP63058 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ThraP63058 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
ThraP63058 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
ThraP63058 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ThraP63058 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms