Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Gm36967-201ENSMUST00000193814 266 ntBASIC11.29□□□□□ -0.6
Rpl39P62892 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rpl39P62892 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rpl39P62892 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rpl39P62892 Tfap2a-203ENSMUST00000223869 2037 ntBASIC11.29□□□□□ -0.6
Rpl39P62892 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rpl39P62892 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rpl39P62892 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Rpl39P62892 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Rpl39P62892 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rpl39P62892 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC11.29□□□□□ -0.6
Rpl39P62892 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rpl39P62892 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Rpl39P62892 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rpl39P62892 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rpl39P62892 AC174678.1-201ENSMUST00000228007 2749 ntBASIC11.29□□□□□ -0.6
Rpl39P62892 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rpl39P62892 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rpl39P62892 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rpl39P62892 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rpl39P62892 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rpl39P62892 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rpl39P62892 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rpl39P62892 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rpl39P62892 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rpl39P62892 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rpl39P62892 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rpl39P62892 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC11.28□□□□□ -0.6
Rpl39P62892 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rpl39P62892 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rpl39P62892 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rpl39P62892 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rpl39P62892 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Rpl39P62892 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rpl39P62892 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rpl39P62892 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rpl39P62892 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Rpl39P62892 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rpl39P62892 Gm5643-201ENSMUST00000117081 966 ntBASIC11.28□□□□□ -0.6
Rpl39P62892 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rpl39P62892 Gm18115-201ENSMUST00000221209 621 ntBASIC11.28□□□□□ -0.6
Rpl39P62892 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC11.28□□□□□ -0.6
Rpl39P62892 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rpl39P62892 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rpl39P62892 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rpl39P62892 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rpl39P62892 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Rpl39P62892 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rpl39P62892 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rpl39P62892 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Rpl39P62892 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rpl39P62892 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rpl39P62892 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rpl39P62892 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rpl39P62892 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rpl39P62892 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rpl39P62892 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rpl39P62892 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rpl39P62892 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Rpl39P62892 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rpl39P62892 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rpl39P62892 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rpl39P62892 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC11.27□□□□□ -0.61
Rpl39P62892 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Rpl39P62892 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rpl39P62892 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Rpl39P62892 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC11.27□□□□□ -0.61
Rpl39P62892 Gm44878-201ENSMUST00000205812 1295 ntBASIC11.27□□□□□ -0.61
Rpl39P62892 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC11.27□□□□□ -0.61
Rpl39P62892 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rpl39P62892 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rpl39P62892 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rpl39P62892 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rpl39P62892 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rpl39P62892 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Rpl39P62892 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rpl39P62892 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rpl39P62892 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rpl39P62892 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rpl39P62892 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Rpl39P62892 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Rpl39P62892 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC11.27□□□□□ -0.61
Rpl39P62892 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rpl39P62892 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rpl39P62892 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Rpl39P62892 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rpl39P62892 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Rpl39P62892 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Rpl39P62892 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Rpl39P62892 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rpl39P62892 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC11.26□□□□□ -0.61
Rpl39P62892 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl39P62892 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl39P62892 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl39P62892 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC11.26□□□□□ -0.61
Rpl39P62892 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl39P62892 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl39P62892 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl39P62892 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl39P62892 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms