Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm6P62313 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Lsm6P62313 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Lsm6P62313 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm6P62313 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm6P62313 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.84□□□□□ -0.19
Lsm6P62313 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm6P62313 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.84□□□□□ -0.19
Lsm6P62313 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm6P62313 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm6P62313 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm6P62313 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm6P62313 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm6P62313 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Lsm6P62313 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm6P62313 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm6P62313 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm6P62313 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Lsm6P62313 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Lsm6P62313 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm6P62313 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.84□□□□□ -0.19
Lsm6P62313 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Lsm6P62313 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13.84□□□□□ -0.19
Lsm6P62313 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm6P62313 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm6P62313 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.84□□□□□ -0.19
Lsm6P62313 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm6P62313 Gm9172-201ENSMUST00000212092 954 ntBASIC13.84□□□□□ -0.19
Lsm6P62313 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm6P62313 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm6P62313 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm6P62313 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm6P62313 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm6P62313 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm6P62313 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm6P62313 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm6P62313 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm6P62313 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm6P62313 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm6P62313 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.84□□□□□ -0.19
Lsm6P62313 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Lsm6P62313 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Lsm6P62313 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Lsm6P62313 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
Lsm6P62313 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm6P62313 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm6P62313 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm6P62313 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm6P62313 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm6P62313 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm6P62313 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13.83□□□□□ -0.2
Lsm6P62313 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm6P62313 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm6P62313 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.83□□□□□ -0.2
Lsm6P62313 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Lsm6P62313 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.83□□□□□ -0.2
Lsm6P62313 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm6P62313 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm6P62313 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm6P62313 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm6P62313 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm6P62313 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm6P62313 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm6P62313 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Lsm6P62313 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm6P62313 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm6P62313 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.83□□□□□ -0.2
Lsm6P62313 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm6P62313 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Lsm6P62313 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm6P62313 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm6P62313 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm6P62313 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm6P62313 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm6P62313 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm6P62313 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Lsm6P62313 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm6P62313 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.82□□□□□ -0.2
Lsm6P62313 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Lsm6P62313 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm6P62313 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm6P62313 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm6P62313 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Lsm6P62313 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC13.82□□□□□ -0.2
Lsm6P62313 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm6P62313 Gm7284-201ENSMUST00000131667 944 ntBASIC13.82□□□□□ -0.2
Lsm6P62313 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.82□□□□□ -0.2
Lsm6P62313 Gm27357-201ENSMUST00000183754 135 ntBASIC13.82□□□□□ -0.2
Lsm6P62313 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm6P62313 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.82□□□□□ -0.2
Lsm6P62313 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm6P62313 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm6P62313 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm6P62313 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm6P62313 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Lsm6P62313 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Lsm6P62313 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.82□□□□□ -0.2
Lsm6P62313 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm6P62313 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm6P62313 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms