Protein–RNA interactions for Protein: P62046

Lrch1, Leucine-rich repeat and calponin homology domain-containing protein 1, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch1P62046 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lrch1P62046 Gm12008-201ENSMUST00000117791 755 ntBASIC18.54■□□□□ 0.56
Lrch1P62046 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC18.54■□□□□ 0.56
Lrch1P62046 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC18.54■□□□□ 0.56
Lrch1P62046 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC18.54■□□□□ 0.56
Lrch1P62046 Gm43767-201ENSMUST00000198933 381 ntBASIC18.54■□□□□ 0.56
Lrch1P62046 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC18.54■□□□□ 0.56
Lrch1P62046 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC18.54■□□□□ 0.56
Lrch1P62046 AC131710.1-201ENSMUST00000228336 990 ntBASIC18.54■□□□□ 0.56
Lrch1P62046 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lrch1P62046 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lrch1P62046 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Lrch1P62046 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lrch1P62046 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Lrch1P62046 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lrch1P62046 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lrch1P62046 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lrch1P62046 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Lrch1P62046 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lrch1P62046 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lrch1P62046 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.53■□□□□ 0.56
Lrch1P62046 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lrch1P62046 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lrch1P62046 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lrch1P62046 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lrch1P62046 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lrch1P62046 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Lrch1P62046 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lrch1P62046 Gm16198-201ENSMUST00000118766 670 ntBASIC18.53■□□□□ 0.56
Lrch1P62046 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lrch1P62046 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Lrch1P62046 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Lrch1P62046 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Lrch1P62046 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC18.53■□□□□ 0.56
Lrch1P62046 Wdyhv1-203ENSMUST00000226889 394 ntBASIC18.53■□□□□ 0.56
Lrch1P62046 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lrch1P62046 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lrch1P62046 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lrch1P62046 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Lrch1P62046 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Lrch1P62046 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lrch1P62046 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lrch1P62046 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lrch1P62046 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Lrch1P62046 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lrch1P62046 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lrch1P62046 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lrch1P62046 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Lrch1P62046 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Lrch1P62046 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lrch1P62046 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
Lrch1P62046 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lrch1P62046 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Lrch1P62046 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC18.52■□□□□ 0.56
Lrch1P62046 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Lrch1P62046 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC18.52■□□□□ 0.56
Lrch1P62046 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lrch1P62046 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC18.52■□□□□ 0.56
Lrch1P62046 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Lrch1P62046 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Lrch1P62046 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lrch1P62046 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lrch1P62046 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Lrch1P62046 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Lrch1P62046 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Lrch1P62046 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Lrch1P62046 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Lrch1P62046 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Lrch1P62046 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Lrch1P62046 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Lrch1P62046 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lrch1P62046 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lrch1P62046 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lrch1P62046 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lrch1P62046 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lrch1P62046 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lrch1P62046 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lrch1P62046 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.51■□□□□ 0.55
Lrch1P62046 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Lrch1P62046 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lrch1P62046 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lrch1P62046 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Lrch1P62046 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lrch1P62046 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC18.51■□□□□ 0.55
Lrch1P62046 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lrch1P62046 Gm13223-201ENSMUST00000118609 747 ntBASIC18.51■□□□□ 0.55
Lrch1P62046 Gm12151-201ENSMUST00000121374 290 ntBASIC18.51■□□□□ 0.55
Lrch1P62046 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Lrch1P62046 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Lrch1P62046 Gm27306-201ENSMUST00000183970 107 ntBASIC18.51■□□□□ 0.55
Lrch1P62046 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Lrch1P62046 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lrch1P62046 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lrch1P62046 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lrch1P62046 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lrch1P62046 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lrch1P62046 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Lrch1P62046 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lrch1P62046 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lrch1P62046 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms