Protein–RNA interactions for Protein: P58873

Rhbdl3, Rhomboid-related protein 3, mousemouse

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhbdl3P58873 Gm17271-201ENSMUST00000165535 355 ntBASIC18.64■□□□□ 0.57
Rhbdl3P58873 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC18.64■□□□□ 0.57
Rhbdl3P58873 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rhbdl3P58873 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rhbdl3P58873 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rhbdl3P58873 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
Rhbdl3P58873 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rhbdl3P58873 Gm13337-201ENSMUST00000119183 1594 ntBASIC18.64■□□□□ 0.57
Rhbdl3P58873 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rhbdl3P58873 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rhbdl3P58873 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rhbdl3P58873 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.63■□□□□ 0.57
Rhbdl3P58873 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Rhbdl3P58873 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rhbdl3P58873 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rhbdl3P58873 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC18.63■□□□□ 0.57
Rhbdl3P58873 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC18.63■□□□□ 0.57
Rhbdl3P58873 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC18.63■□□□□ 0.57
Rhbdl3P58873 Gm18246-201ENSMUST00000221023 728 ntBASIC18.63■□□□□ 0.57
Rhbdl3P58873 AC124549.3-201ENSMUST00000225541 367 ntBASIC18.63■□□□□ 0.57
Rhbdl3P58873 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rhbdl3P58873 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rhbdl3P58873 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rhbdl3P58873 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rhbdl3P58873 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rhbdl3P58873 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rhbdl3P58873 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rhbdl3P58873 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rhbdl3P58873 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rhbdl3P58873 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rhbdl3P58873 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Rhbdl3P58873 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rhbdl3P58873 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rhbdl3P58873 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rhbdl3P58873 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rhbdl3P58873 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rhbdl3P58873 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rhbdl3P58873 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC18.62■□□□□ 0.57
Rhbdl3P58873 Gm8318-201ENSMUST00000182954 872 ntBASIC18.62■□□□□ 0.57
Rhbdl3P58873 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rhbdl3P58873 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rhbdl3P58873 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rhbdl3P58873 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rhbdl3P58873 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rhbdl3P58873 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rhbdl3P58873 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rhbdl3P58873 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.62■□□□□ 0.57
Rhbdl3P58873 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rhbdl3P58873 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rhbdl3P58873 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rhbdl3P58873 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
Rhbdl3P58873 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rhbdl3P58873 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rhbdl3P58873 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rhbdl3P58873 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rhbdl3P58873 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Rhbdl3P58873 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.61■□□□□ 0.57
Rhbdl3P58873 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Rhbdl3P58873 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rhbdl3P58873 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rhbdl3P58873 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC18.61■□□□□ 0.57
Rhbdl3P58873 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rhbdl3P58873 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rhbdl3P58873 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC18.61■□□□□ 0.57
Rhbdl3P58873 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rhbdl3P58873 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rhbdl3P58873 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC18.61■□□□□ 0.57
Rhbdl3P58873 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC18.61■□□□□ 0.57
Rhbdl3P58873 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rhbdl3P58873 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rhbdl3P58873 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rhbdl3P58873 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rhbdl3P58873 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Rhbdl3P58873 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rhbdl3P58873 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rhbdl3P58873 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rhbdl3P58873 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rhbdl3P58873 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rhbdl3P58873 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rhbdl3P58873 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.6■□□□□ 0.57
Rhbdl3P58873 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC18.6■□□□□ 0.57
Rhbdl3P58873 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rhbdl3P58873 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rhbdl3P58873 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Rhbdl3P58873 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Rhbdl3P58873 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rhbdl3P58873 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rhbdl3P58873 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Rhbdl3P58873 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rhbdl3P58873 Mir7036b-201ENSMUST00000184791 63 ntBASIC18.6■□□□□ 0.57
Rhbdl3P58873 AC160980.1-201ENSMUST00000224136 970 ntBASIC18.6■□□□□ 0.57
Rhbdl3P58873 AC154621.1-201ENSMUST00000226155 1119 ntBASIC18.6■□□□□ 0.57
Rhbdl3P58873 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Rhbdl3P58873 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rhbdl3P58873 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rhbdl3P58873 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rhbdl3P58873 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Rhbdl3P58873 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rhbdl3P58873 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rhbdl3P58873 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms