Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkn2bP55271 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.14■□□□□ 0.01
Cdkn2bP55271 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkn2bP55271 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cdkn2bP55271 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkn2bP55271 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkn2bP55271 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkn2bP55271 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cdkn2bP55271 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkn2bP55271 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkn2bP55271 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkn2bP55271 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkn2bP55271 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkn2bP55271 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Cdkn2bP55271 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkn2bP55271 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkn2bP55271 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkn2bP55271 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cdkn2bP55271 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkn2bP55271 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.13■□□□□ 0.01
Cdkn2bP55271 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkn2bP55271 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkn2bP55271 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.12■□□□□ 0.01
Cdkn2bP55271 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkn2bP55271 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkn2bP55271 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkn2bP55271 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkn2bP55271 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkn2bP55271 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkn2bP55271 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkn2bP55271 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkn2bP55271 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkn2bP55271 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Cdkn2bP55271 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkn2bP55271 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkn2bP55271 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Cdkn2bP55271 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.12■□□□□ 0.01
Cdkn2bP55271 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkn2bP55271 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Cdkn2bP55271 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Cdkn2bP55271 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkn2bP55271 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.12■□□□□ 0.01
Cdkn2bP55271 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Cdkn2bP55271 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkn2bP55271 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Cdkn2bP55271 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Cdkn2bP55271 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkn2bP55271 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.12■□□□□ 0.01
Cdkn2bP55271 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdkn2bP55271 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Cdkn2bP55271 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Cdkn2bP55271 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Cdkn2bP55271 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdkn2bP55271 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdkn2bP55271 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdkn2bP55271 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdkn2bP55271 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdkn2bP55271 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.11■□□□□ 0.01
Cdkn2bP55271 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdkn2bP55271 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdkn2bP55271 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.11■□□□□ 0.01
Cdkn2bP55271 Gm22697-201ENSMUST00000175194 63 ntBASIC15.11■□□□□ 0.01
Cdkn2bP55271 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.11■□□□□ 0.01
Cdkn2bP55271 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.11■□□□□ 0.01
Cdkn2bP55271 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Cdkn2bP55271 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Cdkn2bP55271 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.11■□□□□ 0.01
Cdkn2bP55271 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdkn2bP55271 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdkn2bP55271 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Cdkn2bP55271 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdkn2bP55271 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdkn2bP55271 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdkn2bP55271 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdkn2bP55271 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.11■□□□□ 0.01
Cdkn2bP55271 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cdkn2bP55271 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.1■□□□□ 0.01
Cdkn2bP55271 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkn2bP55271 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkn2bP55271 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkn2bP55271 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Cdkn2bP55271 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkn2bP55271 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkn2bP55271 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Cdkn2bP55271 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkn2bP55271 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkn2bP55271 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkn2bP55271 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC15.1■□□□□ 0.01
Cdkn2bP55271 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkn2bP55271 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC15.1■□□□□ 0.01
Cdkn2bP55271 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.1■□□□□ 0.01
Cdkn2bP55271 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.1■□□□□ 0.01
Cdkn2bP55271 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkn2bP55271 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkn2bP55271 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkn2bP55271 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Cdkn2bP55271 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkn2bP55271 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkn2bP55271 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Cdkn2bP55271 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms