Protein–RNA interactions for Protein: P54285

Cacnb3, Voltage-dependent L-type calcium channel subunit beta-3, mousemouse

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb3P54285 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cacnb3P54285 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cacnb3P54285 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cacnb3P54285 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.35■□□□□ 0.53
Cacnb3P54285 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cacnb3P54285 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cacnb3P54285 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.34■□□□□ 0.53
Cacnb3P54285 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Cacnb3P54285 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cacnb3P54285 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cacnb3P54285 Gm12892-201ENSMUST00000117367 1146 ntBASIC18.34■□□□□ 0.53
Cacnb3P54285 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cacnb3P54285 AC155252.2-201ENSMUST00000226946 680 ntBASIC18.34■□□□□ 0.53
Cacnb3P54285 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Cacnb3P54285 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cacnb3P54285 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cacnb3P54285 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cacnb3P54285 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cacnb3P54285 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cacnb3P54285 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cacnb3P54285 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cacnb3P54285 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cacnb3P54285 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cacnb3P54285 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cacnb3P54285 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cacnb3P54285 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cacnb3P54285 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cacnb3P54285 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cacnb3P54285 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Cacnb3P54285 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC18.33■□□□□ 0.52
Cacnb3P54285 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cacnb3P54285 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC18.33■□□□□ 0.52
Cacnb3P54285 AC158538.2-201ENSMUST00000225455 906 ntBASIC18.33■□□□□ 0.52
Cacnb3P54285 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC18.33■□□□□ 0.52
Cacnb3P54285 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Cacnb3P54285 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cacnb3P54285 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cacnb3P54285 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cacnb3P54285 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cacnb3P54285 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cacnb3P54285 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cacnb3P54285 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cacnb3P54285 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cacnb3P54285 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cacnb3P54285 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cacnb3P54285 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cacnb3P54285 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cacnb3P54285 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.32■□□□□ 0.52
Cacnb3P54285 Haglr-201ENSMUST00000100000 2085 ntBASIC18.32■□□□□ 0.52
Cacnb3P54285 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Cacnb3P54285 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cacnb3P54285 Gm5366-201ENSMUST00000215494 1338 ntBASIC18.32■□□□□ 0.52
Cacnb3P54285 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cacnb3P54285 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cacnb3P54285 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Cacnb3P54285 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Cacnb3P54285 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Cacnb3P54285 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cacnb3P54285 Gm5177-201ENSMUST00000183092 997 ntBASIC18.32■□□□□ 0.52
Cacnb3P54285 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cacnb3P54285 Mir7036b-201ENSMUST00000184791 63 ntBASIC18.32■□□□□ 0.52
Cacnb3P54285 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
Cacnb3P54285 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cacnb3P54285 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.32■□□□□ 0.52
Cacnb3P54285 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC18.32■□□□□ 0.52
Cacnb3P54285 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cacnb3P54285 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cacnb3P54285 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cacnb3P54285 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cacnb3P54285 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cacnb3P54285 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Cacnb3P54285 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Cacnb3P54285 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Cacnb3P54285 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cacnb3P54285 Gm13294-201ENSMUST00000121757 1330 ntBASIC18.31■□□□□ 0.52
Cacnb3P54285 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cacnb3P54285 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Cacnb3P54285 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cacnb3P54285 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC18.31■□□□□ 0.52
Cacnb3P54285 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC18.31■□□□□ 0.52
Cacnb3P54285 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC18.31■□□□□ 0.52
Cacnb3P54285 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cacnb3P54285 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC18.31■□□□□ 0.52
Cacnb3P54285 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cacnb3P54285 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cacnb3P54285 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cacnb3P54285 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cacnb3P54285 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cacnb3P54285 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Cacnb3P54285 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cacnb3P54285 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cacnb3P54285 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Cacnb3P54285 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.3■□□□□ 0.52
Cacnb3P54285 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Cacnb3P54285 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cacnb3P54285 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.3■□□□□ 0.52
Cacnb3P54285 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cacnb3P54285 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC18.3■□□□□ 0.52
Cacnb3P54285 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.3■□□□□ 0.52
Cacnb3P54285 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms