Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SftpbP50405 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SftpbP50405 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SftpbP50405 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SftpbP50405 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SftpbP50405 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SftpbP50405 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SftpbP50405 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
SftpbP50405 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SftpbP50405 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.19■□□□□ 0.18
SftpbP50405 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.19■□□□□ 0.18
SftpbP50405 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
SftpbP50405 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SftpbP50405 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SftpbP50405 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SftpbP50405 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
SftpbP50405 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SftpbP50405 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.19■□□□□ 0.18
SftpbP50405 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SftpbP50405 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
SftpbP50405 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SftpbP50405 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SftpbP50405 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SftpbP50405 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.18■□□□□ 0.18
SftpbP50405 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SftpbP50405 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SftpbP50405 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.18■□□□□ 0.18
SftpbP50405 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SftpbP50405 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SftpbP50405 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SftpbP50405 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SftpbP50405 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SftpbP50405 Gm11355-201ENSMUST00000121120 306 ntBASIC16.18■□□□□ 0.18
SftpbP50405 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.18■□□□□ 0.18
SftpbP50405 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SftpbP50405 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SftpbP50405 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
SftpbP50405 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SftpbP50405 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
SftpbP50405 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
SftpbP50405 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.18■□□□□ 0.18
SftpbP50405 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.18■□□□□ 0.18
SftpbP50405 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SftpbP50405 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SftpbP50405 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SftpbP50405 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.18■□□□□ 0.18
SftpbP50405 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SftpbP50405 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SftpbP50405 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.18■□□□□ 0.18
SftpbP50405 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SftpbP50405 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SftpbP50405 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SftpbP50405 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SftpbP50405 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SftpbP50405 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SftpbP50405 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.17■□□□□ 0.18
SftpbP50405 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SftpbP50405 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.17■□□□□ 0.18
SftpbP50405 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.17■□□□□ 0.18
SftpbP50405 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SftpbP50405 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SftpbP50405 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SftpbP50405 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SftpbP50405 Gm10052-201ENSMUST00000168019 960 ntBASIC16.17■□□□□ 0.18
SftpbP50405 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.17■□□□□ 0.18
SftpbP50405 Mir6982-201ENSMUST00000184354 68 ntBASIC16.17■□□□□ 0.18
SftpbP50405 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SftpbP50405 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.17■□□□□ 0.18
SftpbP50405 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.17■□□□□ 0.18
SftpbP50405 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SftpbP50405 Gm18101-201ENSMUST00000215769 548 ntBASIC16.17■□□□□ 0.18
SftpbP50405 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SftpbP50405 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SftpbP50405 Gm7729-201ENSMUST00000050143 801 ntBASIC16.17■□□□□ 0.18
SftpbP50405 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.17■□□□□ 0.18
SftpbP50405 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SftpbP50405 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SftpbP50405 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SftpbP50405 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SftpbP50405 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SftpbP50405 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SftpbP50405 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SftpbP50405 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SftpbP50405 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SftpbP50405 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SftpbP50405 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SftpbP50405 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SftpbP50405 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SftpbP50405 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SftpbP50405 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SftpbP50405 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SftpbP50405 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SftpbP50405 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.16■□□□□ 0.18
SftpbP50405 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SftpbP50405 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
SftpbP50405 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SftpbP50405 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SftpbP50405 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
SftpbP50405 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SftpbP50405 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms