Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Brca1P48754 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Brca1P48754 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
Brca1P48754 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Brca1P48754 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Brca1P48754 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Brca1P48754 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Brca1P48754 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Brca1P48754 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Brca1P48754 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Brca1P48754 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Brca1P48754 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17.58■□□□□ 0.4
Brca1P48754 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Brca1P48754 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Brca1P48754 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Brca1P48754 Gm10499-201ENSMUST00000174094 934 ntBASIC17.58■□□□□ 0.4
Brca1P48754 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC17.58■□□□□ 0.4
Brca1P48754 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Brca1P48754 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Brca1P48754 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Brca1P48754 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Brca1P48754 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Brca1P48754 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Brca1P48754 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.57■□□□□ 0.4
Brca1P48754 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Brca1P48754 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Brca1P48754 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Brca1P48754 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Brca1P48754 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Brca1P48754 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Brca1P48754 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Brca1P48754 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Brca1P48754 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Brca1P48754 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Brca1P48754 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Brca1P48754 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Brca1P48754 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Brca1P48754 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.57■□□□□ 0.4
Brca1P48754 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Brca1P48754 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Brca1P48754 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Brca1P48754 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Brca1P48754 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Brca1P48754 Gm27306-201ENSMUST00000183970 107 ntBASIC17.56■□□□□ 0.4
Brca1P48754 Gm2272-201ENSMUST00000194903 582 ntBASIC17.56■□□□□ 0.4
Brca1P48754 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Brca1P48754 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Brca1P48754 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.56■□□□□ 0.4
Brca1P48754 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Brca1P48754 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Brca1P48754 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Brca1P48754 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Brca1P48754 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.56■□□□□ 0.4
Brca1P48754 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17.56■□□□□ 0.4
Brca1P48754 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Brca1P48754 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Brca1P48754 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Brca1P48754 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Brca1P48754 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.56■□□□□ 0.4
Brca1P48754 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Brca1P48754 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Brca1P48754 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Brca1P48754 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.55■□□□□ 0.4
Brca1P48754 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Brca1P48754 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Brca1P48754 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Brca1P48754 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Brca1P48754 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Brca1P48754 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Brca1P48754 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Brca1P48754 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Brca1P48754 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Brca1P48754 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Brca1P48754 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Brca1P48754 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Brca1P48754 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Brca1P48754 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.55■□□□□ 0.4
Brca1P48754 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Brca1P48754 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Brca1P48754 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Brca1P48754 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Brca1P48754 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Brca1P48754 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Brca1P48754 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Brca1P48754 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Brca1P48754 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Brca1P48754 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.54■□□□□ 0.4
Brca1P48754 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.54■□□□□ 0.4
Brca1P48754 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Brca1P48754 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC17.54■□□□□ 0.4
Brca1P48754 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Brca1P48754 Mir8102-201ENSMUST00000184148 139 ntBASIC17.54■□□□□ 0.4
Brca1P48754 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC17.54■□□□□ 0.4
Brca1P48754 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC17.54■□□□□ 0.4
Brca1P48754 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.54■□□□□ 0.4
Brca1P48754 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Brca1P48754 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Brca1P48754 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Brca1P48754 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Brca1P48754 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms