Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Hist1h1aP43275 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hist1h1aP43275 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hist1h1aP43275 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hist1h1aP43275 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC13.06□□□□□ -0.32
Hist1h1aP43275 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hist1h1aP43275 Gm11336-201ENSMUST00000118168 334 ntBASIC13.06□□□□□ -0.32
Hist1h1aP43275 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.06□□□□□ -0.32
Hist1h1aP43275 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hist1h1aP43275 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Hist1h1aP43275 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC13.06□□□□□ -0.32
Hist1h1aP43275 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC13.06□□□□□ -0.32
Hist1h1aP43275 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hist1h1aP43275 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hist1h1aP43275 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hist1h1aP43275 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hist1h1aP43275 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hist1h1aP43275 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hist1h1aP43275 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Hist1h1aP43275 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Hist1h1aP43275 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hist1h1aP43275 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Hist1h1aP43275 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Hist1h1aP43275 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Hist1h1aP43275 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.06□□□□□ -0.32
Hist1h1aP43275 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hist1h1aP43275 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Hist1h1aP43275 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hist1h1aP43275 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Hist1h1aP43275 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hist1h1aP43275 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hist1h1aP43275 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.05□□□□□ -0.32
Hist1h1aP43275 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Hist1h1aP43275 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Hist1h1aP43275 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Hist1h1aP43275 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hist1h1aP43275 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hist1h1aP43275 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hist1h1aP43275 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hist1h1aP43275 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hist1h1aP43275 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Hist1h1aP43275 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Hist1h1aP43275 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hist1h1aP43275 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC13.05□□□□□ -0.32
Hist1h1aP43275 Gm29994-201ENSMUST00000195495 1193 ntBASIC13.05□□□□□ -0.32
Hist1h1aP43275 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC13.05□□□□□ -0.32
Hist1h1aP43275 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Hist1h1aP43275 AC159205.6-201ENSMUST00000224935 887 ntBASIC13.05□□□□□ -0.32
Hist1h1aP43275 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hist1h1aP43275 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hist1h1aP43275 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Hist1h1aP43275 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Hist1h1aP43275 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Hist1h1aP43275 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hist1h1aP43275 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC13.05□□□□□ -0.32
Hist1h1aP43275 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC13.05□□□□□ -0.32
Hist1h1aP43275 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hist1h1aP43275 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hist1h1aP43275 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hist1h1aP43275 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hist1h1aP43275 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Hist1h1aP43275 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hist1h1aP43275 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hist1h1aP43275 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Hist1h1aP43275 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.05□□□□□ -0.32
Hist1h1aP43275 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hist1h1aP43275 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hist1h1aP43275 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hist1h1aP43275 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Hist1h1aP43275 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h1aP43275 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h1aP43275 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h1aP43275 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h1aP43275 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h1aP43275 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h1aP43275 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h1aP43275 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.04□□□□□ -0.32
Hist1h1aP43275 Gm13436-201ENSMUST00000120418 567 ntBASIC13.04□□□□□ -0.32
Hist1h1aP43275 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Hist1h1aP43275 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h1aP43275 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC13.04□□□□□ -0.32
Hist1h1aP43275 Gm29707-201ENSMUST00000196325 491 ntBASIC13.04□□□□□ -0.32
Hist1h1aP43275 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.04□□□□□ -0.32
Hist1h1aP43275 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Hist1h1aP43275 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h1aP43275 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h1aP43275 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.04□□□□□ -0.32
Hist1h1aP43275 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.04□□□□□ -0.32
Hist1h1aP43275 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h1aP43275 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h1aP43275 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.04□□□□□ -0.32
Hist1h1aP43275 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Hist1h1aP43275 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h1aP43275 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h1aP43275 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h1aP43275 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h1aP43275 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h1aP43275 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h1aP43275 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h1aP43275 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms