Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cxcl12P40224 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cxcl12P40224 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cxcl12P40224 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cxcl12P40224 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cxcl12P40224 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Cxcl12P40224 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cxcl12P40224 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cxcl12P40224 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cxcl12P40224 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cxcl12P40224 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cxcl12P40224 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cxcl12P40224 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cxcl12P40224 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cxcl12P40224 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Cxcl12P40224 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cxcl12P40224 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC16.21■□□□□ 0.19
Cxcl12P40224 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC16.21■□□□□ 0.19
Cxcl12P40224 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Cxcl12P40224 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cxcl12P40224 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cxcl12P40224 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cxcl12P40224 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cxcl12P40224 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cxcl12P40224 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Cxcl12P40224 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Cxcl12P40224 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cxcl12P40224 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cxcl12P40224 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.21■□□□□ 0.19
Cxcl12P40224 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.21■□□□□ 0.19
Cxcl12P40224 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.21■□□□□ 0.19
Cxcl12P40224 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cxcl12P40224 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cxcl12P40224 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cxcl12P40224 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Cxcl12P40224 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cxcl12P40224 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cxcl12P40224 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cxcl12P40224 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cxcl12P40224 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cxcl12P40224 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cxcl12P40224 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cxcl12P40224 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cxcl12P40224 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cxcl12P40224 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cxcl12P40224 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cxcl12P40224 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cxcl12P40224 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cxcl12P40224 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.2■□□□□ 0.18
Cxcl12P40224 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC16.2■□□□□ 0.18
Cxcl12P40224 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cxcl12P40224 Mir8102-201ENSMUST00000184148 139 ntBASIC16.2■□□□□ 0.18
Cxcl12P40224 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Cxcl12P40224 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cxcl12P40224 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cxcl12P40224 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cxcl12P40224 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cxcl12P40224 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cxcl12P40224 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.2■□□□□ 0.18
Cxcl12P40224 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cxcl12P40224 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cxcl12P40224 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Cxcl12P40224 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cxcl12P40224 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cxcl12P40224 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cxcl12P40224 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cxcl12P40224 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cxcl12P40224 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Cxcl12P40224 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cxcl12P40224 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cxcl12P40224 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cxcl12P40224 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cxcl12P40224 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cxcl12P40224 Gm16198-201ENSMUST00000118766 670 ntBASIC16.19■□□□□ 0.18
Cxcl12P40224 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cxcl12P40224 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cxcl12P40224 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC16.19■□□□□ 0.18
Cxcl12P40224 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC16.19■□□□□ 0.18
Cxcl12P40224 Wdyhv1-203ENSMUST00000226889 394 ntBASIC16.19■□□□□ 0.18
Cxcl12P40224 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cxcl12P40224 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cxcl12P40224 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cxcl12P40224 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.19■□□□□ 0.18
Cxcl12P40224 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cxcl12P40224 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cxcl12P40224 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cxcl12P40224 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cxcl12P40224 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cxcl12P40224 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cxcl12P40224 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cxcl12P40224 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cxcl12P40224 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cxcl12P40224 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cxcl12P40224 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.18■□□□□ 0.18
Cxcl12P40224 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Cxcl12P40224 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cxcl12P40224 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Cxcl12P40224 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Cxcl12P40224 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC16.18■□□□□ 0.18
Cxcl12P40224 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms