Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LdlrP35951 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LdlrP35951 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LdlrP35951 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LdlrP35951 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LdlrP35951 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LdlrP35951 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
LdlrP35951 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LdlrP35951 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LdlrP35951 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LdlrP35951 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LdlrP35951 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LdlrP35951 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LdlrP35951 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
LdlrP35951 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LdlrP35951 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
LdlrP35951 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.72■□□□□ 0.11
LdlrP35951 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LdlrP35951 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LdlrP35951 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LdlrP35951 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LdlrP35951 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LdlrP35951 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
LdlrP35951 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LdlrP35951 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.72■□□□□ 0.11
LdlrP35951 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
LdlrP35951 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LdlrP35951 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LdlrP35951 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LdlrP35951 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LdlrP35951 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LdlrP35951 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LdlrP35951 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LdlrP35951 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LdlrP35951 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.71■□□□□ 0.11
LdlrP35951 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LdlrP35951 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LdlrP35951 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.71■□□□□ 0.11
LdlrP35951 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LdlrP35951 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LdlrP35951 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LdlrP35951 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LdlrP35951 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LdlrP35951 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LdlrP35951 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
LdlrP35951 Gm11950-201ENSMUST00000121615 838 ntBASIC15.71■□□□□ 0.11
LdlrP35951 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LdlrP35951 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LdlrP35951 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LdlrP35951 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.71■□□□□ 0.11
LdlrP35951 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
LdlrP35951 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LdlrP35951 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LdlrP35951 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LdlrP35951 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LdlrP35951 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LdlrP35951 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.11
LdlrP35951 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LdlrP35951 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
LdlrP35951 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
LdlrP35951 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
LdlrP35951 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.71■□□□□ 0.11
LdlrP35951 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.71■□□□□ 0.1
LdlrP35951 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LdlrP35951 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
LdlrP35951 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.1
LdlrP35951 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LdlrP35951 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LdlrP35951 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LdlrP35951 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LdlrP35951 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
LdlrP35951 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
LdlrP35951 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LdlrP35951 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LdlrP35951 Mir3081-201ENSMUST00000175305 84 ntBASIC15.7■□□□□ 0.1
LdlrP35951 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
LdlrP35951 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
LdlrP35951 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LdlrP35951 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
LdlrP35951 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LdlrP35951 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LdlrP35951 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
LdlrP35951 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
LdlrP35951 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.7■□□□□ 0.1
LdlrP35951 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
LdlrP35951 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LdlrP35951 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LdlrP35951 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LdlrP35951 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LdlrP35951 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LdlrP35951 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LdlrP35951 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LdlrP35951 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LdlrP35951 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
LdlrP35951 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LdlrP35951 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LdlrP35951 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LdlrP35951 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
LdlrP35951 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
LdlrP35951 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms