Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfc1P35601 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Rfc1P35601 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfc1P35601 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfc1P35601 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.67■□□□□ 0.26
Rfc1P35601 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfc1P35601 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.67■□□□□ 0.26
Rfc1P35601 Gm7638-201ENSMUST00000121348 967 ntBASIC16.67■□□□□ 0.26
Rfc1P35601 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Rfc1P35601 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.67■□□□□ 0.26
Rfc1P35601 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rfc1P35601 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfc1P35601 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.67■□□□□ 0.26
Rfc1P35601 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfc1P35601 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfc1P35601 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfc1P35601 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfc1P35601 Gm43399-201ENSMUST00000202546 2374 ntBASIC16.67■□□□□ 0.26
Rfc1P35601 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfc1P35601 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfc1P35601 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfc1P35601 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfc1P35601 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.67■□□□□ 0.26
Rfc1P35601 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfc1P35601 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rfc1P35601 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Rfc1P35601 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rfc1P35601 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rfc1P35601 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Rfc1P35601 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Rfc1P35601 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfc1P35601 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rfc1P35601 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Rfc1P35601 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rfc1P35601 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfc1P35601 Gm715-201ENSMUST00000117865 831 ntBASIC16.66■□□□□ 0.26
Rfc1P35601 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.66■□□□□ 0.26
Rfc1P35601 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rfc1P35601 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rfc1P35601 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.66■□□□□ 0.26
Rfc1P35601 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Rfc1P35601 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfc1P35601 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfc1P35601 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rfc1P35601 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfc1P35601 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfc1P35601 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfc1P35601 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rfc1P35601 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfc1P35601 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfc1P35601 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
Rfc1P35601 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Rfc1P35601 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rfc1P35601 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfc1P35601 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfc1P35601 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfc1P35601 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfc1P35601 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfc1P35601 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Rfc1P35601 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfc1P35601 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rfc1P35601 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfc1P35601 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rfc1P35601 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC16.65■□□□□ 0.26
Rfc1P35601 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfc1P35601 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfc1P35601 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfc1P35601 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfc1P35601 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rfc1P35601 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.65■□□□□ 0.26
Rfc1P35601 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfc1P35601 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.65■□□□□ 0.26
Rfc1P35601 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.65■□□□□ 0.26
Rfc1P35601 Timm23-208ENSMUST00000226683 750 ntBASIC16.65■□□□□ 0.26
Rfc1P35601 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfc1P35601 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Rfc1P35601 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
Rfc1P35601 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfc1P35601 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rfc1P35601 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Rfc1P35601 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfc1P35601 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Rfc1P35601 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Rfc1P35601 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Rfc1P35601 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Rfc1P35601 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Rfc1P35601 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rfc1P35601 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rfc1P35601 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.64■□□□□ 0.25
Rfc1P35601 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfc1P35601 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfc1P35601 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.64■□□□□ 0.25
Rfc1P35601 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.64■□□□□ 0.25
Rfc1P35601 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.64■□□□□ 0.25
Rfc1P35601 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfc1P35601 Gm10812-201ENSMUST00000099864 546 ntBASIC16.64■□□□□ 0.25
Rfc1P35601 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Rfc1P35601 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfc1P35601 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfc1P35601 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms