Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a1P31648 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a1P31648 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.61□□□□□ -0.23
Slc6a1P31648 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a1P31648 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a1P31648 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a1P31648 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a1P31648 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a1P31648 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Slc6a1P31648 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a1P31648 Krtap5-1-202ENSMUST00000188274 742 ntBASIC13.61□□□□□ -0.23
Slc6a1P31648 Gm9484-201ENSMUST00000195892 1159 ntBASIC13.61□□□□□ -0.23
Slc6a1P31648 Gm16042-201ENSMUST00000204813 1247 ntBASIC13.61□□□□□ -0.23
Slc6a1P31648 Arhgef4-208ENSMUST00000211073 171 ntBASIC13.61□□□□□ -0.23
Slc6a1P31648 Gm5417-201ENSMUST00000079706 384 ntBASIC13.61□□□□□ -0.23
Slc6a1P31648 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Slc6a1P31648 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a1P31648 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a1P31648 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a1P31648 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a1P31648 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a1P31648 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a1P31648 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a1P31648 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Slc6a1P31648 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a1P31648 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a1P31648 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a1P31648 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a1P31648 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a1P31648 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a1P31648 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a1P31648 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a1P31648 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a1P31648 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC13.6□□□□□ -0.23
Slc6a1P31648 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a1P31648 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.6□□□□□ -0.23
Slc6a1P31648 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.6□□□□□ -0.23
Slc6a1P31648 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a1P31648 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a1P31648 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC13.6□□□□□ -0.23
Slc6a1P31648 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a1P31648 Gm17661-201ENSMUST00000170317 270 ntBASIC13.6□□□□□ -0.23
Slc6a1P31648 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a1P31648 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a1P31648 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a1P31648 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a1P31648 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a1P31648 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a1P31648 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.6□□□□□ -0.23
Slc6a1P31648 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a1P31648 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a1P31648 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a1P31648 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Slc6a1P31648 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a1P31648 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a1P31648 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a1P31648 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a1P31648 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a1P31648 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a1P31648 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.6□□□□□ -0.23
Slc6a1P31648 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a1P31648 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a1P31648 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.6□□□□□ -0.23
Slc6a1P31648 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a1P31648 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a1P31648 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Slc6a1P31648 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a1P31648 Gm7712-202ENSMUST00000222331 1510 ntBASIC13.59□□□□□ -0.23
Slc6a1P31648 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a1P31648 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a1P31648 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a1P31648 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a1P31648 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a1P31648 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a1P31648 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a1P31648 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a1P31648 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a1P31648 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Slc6a1P31648 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a1P31648 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a1P31648 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a1P31648 Gm6433-201ENSMUST00000118634 875 ntBASIC13.59□□□□□ -0.23
Slc6a1P31648 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Slc6a1P31648 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a1P31648 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Slc6a1P31648 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a1P31648 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a1P31648 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a1P31648 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a1P31648 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Slc6a1P31648 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a1P31648 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a1P31648 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a1P31648 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a1P31648 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a1P31648 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a1P31648 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Slc6a1P31648 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a1P31648 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc6a1P31648 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms