Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col2a1P28481 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC17.75■□□□□ 0.43
Col2a1P28481 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC17.75■□□□□ 0.43
Col2a1P28481 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col2a1P28481 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.75■□□□□ 0.43
Col2a1P28481 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Col2a1P28481 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Col2a1P28481 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col2a1P28481 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Col2a1P28481 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col2a1P28481 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col2a1P28481 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Col2a1P28481 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col2a1P28481 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col2a1P28481 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col2a1P28481 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col2a1P28481 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col2a1P28481 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col2a1P28481 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Col2a1P28481 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col2a1P28481 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC17.74■□□□□ 0.43
Col2a1P28481 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Col2a1P28481 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col2a1P28481 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col2a1P28481 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.74■□□□□ 0.43
Col2a1P28481 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col2a1P28481 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col2a1P28481 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col2a1P28481 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col2a1P28481 Grk6-207ENSMUST00000225925 2769 ntBASIC17.73■□□□□ 0.43
Col2a1P28481 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col2a1P28481 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col2a1P28481 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Col2a1P28481 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col2a1P28481 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Col2a1P28481 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.73■□□□□ 0.43
Col2a1P28481 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col2a1P28481 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC17.73■□□□□ 0.43
Col2a1P28481 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
Col2a1P28481 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.73■□□□□ 0.43
Col2a1P28481 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col2a1P28481 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col2a1P28481 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col2a1P28481 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.73■□□□□ 0.43
Col2a1P28481 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col2a1P28481 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Col2a1P28481 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col2a1P28481 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col2a1P28481 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col2a1P28481 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.72■□□□□ 0.43
Col2a1P28481 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Col2a1P28481 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col2a1P28481 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col2a1P28481 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Col2a1P28481 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Col2a1P28481 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col2a1P28481 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col2a1P28481 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.72■□□□□ 0.43
Col2a1P28481 Gm9385-201ENSMUST00000117563 472 ntBASIC17.72■□□□□ 0.43
Col2a1P28481 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.72■□□□□ 0.43
Col2a1P28481 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC17.72■□□□□ 0.43
Col2a1P28481 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC17.72■□□□□ 0.43
Col2a1P28481 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC17.72■□□□□ 0.43
Col2a1P28481 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col2a1P28481 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col2a1P28481 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col2a1P28481 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC17.72■□□□□ 0.43
Col2a1P28481 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Col2a1P28481 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col2a1P28481 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col2a1P28481 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Col2a1P28481 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.72■□□□□ 0.43
Col2a1P28481 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col2a1P28481 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col2a1P28481 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col2a1P28481 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Col2a1P28481 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col2a1P28481 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col2a1P28481 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.71■□□□□ 0.43
Col2a1P28481 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Col2a1P28481 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.71■□□□□ 0.43
Col2a1P28481 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col2a1P28481 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.71■□□□□ 0.43
Col2a1P28481 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col2a1P28481 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.71■□□□□ 0.43
Col2a1P28481 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col2a1P28481 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Col2a1P28481 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col2a1P28481 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Col2a1P28481 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col2a1P28481 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col2a1P28481 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Col2a1P28481 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Col2a1P28481 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col2a1P28481 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col2a1P28481 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col2a1P28481 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col2a1P28481 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col2a1P28481 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Col2a1P28481 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms