Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl6P27784 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.34□□□□□ -0.43
Ccl6P27784 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl6P27784 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl6P27784 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl6P27784 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl6P27784 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ccl6P27784 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl6P27784 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl6P27784 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ccl6P27784 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ccl6P27784 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC12.33□□□□□ -0.44
Ccl6P27784 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl6P27784 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl6P27784 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl6P27784 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Ccl6P27784 Gm45328-201ENSMUST00000210942 917 ntBASIC12.33□□□□□ -0.44
Ccl6P27784 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl6P27784 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl6P27784 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl6P27784 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ccl6P27784 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl6P27784 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl6P27784 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl6P27784 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl6P27784 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl6P27784 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl6P27784 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl6P27784 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl6P27784 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl6P27784 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl6P27784 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl6P27784 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl6P27784 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl6P27784 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.32□□□□□ -0.44
Ccl6P27784 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl6P27784 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ccl6P27784 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl6P27784 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl6P27784 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12.32□□□□□ -0.44
Ccl6P27784 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl6P27784 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl6P27784 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl6P27784 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl6P27784 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl6P27784 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl6P27784 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.32□□□□□ -0.44
Ccl6P27784 CT009713.7-201ENSMUST00000224689 571 ntBASIC12.32□□□□□ -0.44
Ccl6P27784 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ccl6P27784 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl6P27784 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl6P27784 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Ccl6P27784 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl6P27784 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl6P27784 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl6P27784 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl6P27784 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC12.32□□□□□ -0.44
Ccl6P27784 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl6P27784 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl6P27784 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl6P27784 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl6P27784 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl6P27784 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Ccl6P27784 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl6P27784 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl6P27784 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccl6P27784 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl6P27784 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl6P27784 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccl6P27784 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl6P27784 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl6P27784 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl6P27784 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ccl6P27784 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ccl6P27784 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl6P27784 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ccl6P27784 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl6P27784 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.31□□□□□ -0.44
Ccl6P27784 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC12.31□□□□□ -0.44
Ccl6P27784 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Ccl6P27784 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Ccl6P27784 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC12.31□□□□□ -0.44
Ccl6P27784 AC125350.1-201ENSMUST00000225115 903 ntBASIC12.31□□□□□ -0.44
Ccl6P27784 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl6P27784 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl6P27784 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl6P27784 Gm6858-201ENSMUST00000208582 1468 ntBASIC12.31□□□□□ -0.44
Ccl6P27784 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl6P27784 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl6P27784 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl6P27784 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl6P27784 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ccl6P27784 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ccl6P27784 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Ccl6P27784 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl6P27784 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl6P27784 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl6P27784 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl6P27784 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl6P27784 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms