Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Cd40lgP27548 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cd40lgP27548 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cd40lgP27548 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cd40lgP27548 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cd40lgP27548 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cd40lgP27548 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
Cd40lgP27548 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cd40lgP27548 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cd40lgP27548 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Cd40lgP27548 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cd40lgP27548 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cd40lgP27548 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Cd40lgP27548 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cd40lgP27548 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cd40lgP27548 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.54□□□□□ -0.08
Cd40lgP27548 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cd40lgP27548 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cd40lgP27548 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cd40lgP27548 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cd40lgP27548 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Cd40lgP27548 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cd40lgP27548 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cd40lgP27548 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cd40lgP27548 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cd40lgP27548 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cd40lgP27548 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Cd40lgP27548 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cd40lgP27548 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.54□□□□□ -0.08
Cd40lgP27548 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cd40lgP27548 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cd40lgP27548 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Cd40lgP27548 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Cd40lgP27548 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cd40lgP27548 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cd40lgP27548 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.53□□□□□ -0.08
Cd40lgP27548 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cd40lgP27548 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cd40lgP27548 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cd40lgP27548 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.53□□□□□ -0.08
Cd40lgP27548 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.53□□□□□ -0.08
Cd40lgP27548 Gm36967-201ENSMUST00000193814 266 ntBASIC14.53□□□□□ -0.08
Cd40lgP27548 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.53□□□□□ -0.08
Cd40lgP27548 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cd40lgP27548 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cd40lgP27548 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cd40lgP27548 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cd40lgP27548 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cd40lgP27548 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cd40lgP27548 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Cd40lgP27548 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Cd40lgP27548 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cd40lgP27548 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.53□□□□□ -0.08
Cd40lgP27548 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cd40lgP27548 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cd40lgP27548 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cd40lgP27548 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cd40lgP27548 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cd40lgP27548 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cd40lgP27548 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cd40lgP27548 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.52□□□□□ -0.08
Cd40lgP27548 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cd40lgP27548 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.52□□□□□ -0.08
Cd40lgP27548 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cd40lgP27548 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cd40lgP27548 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cd40lgP27548 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cd40lgP27548 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.52□□□□□ -0.08
Cd40lgP27548 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Cd40lgP27548 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cd40lgP27548 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.52□□□□□ -0.09
Cd40lgP27548 Gm13216-201ENSMUST00000117145 591 ntBASIC14.52□□□□□ -0.09
Cd40lgP27548 Gm12895-201ENSMUST00000122214 226 ntBASIC14.52□□□□□ -0.09
Cd40lgP27548 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cd40lgP27548 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.52□□□□□ -0.09
Cd40lgP27548 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.52□□□□□ -0.09
Cd40lgP27548 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.52□□□□□ -0.09
Cd40lgP27548 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.52□□□□□ -0.09
Cd40lgP27548 Gm44454-201ENSMUST00000198541 138 ntBASIC14.52□□□□□ -0.09
Cd40lgP27548 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Cd40lgP27548 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.52□□□□□ -0.09
Cd40lgP27548 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Cd40lgP27548 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cd40lgP27548 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cd40lgP27548 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cd40lgP27548 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cd40lgP27548 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cd40lgP27548 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cd40lgP27548 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cd40lgP27548 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cd40lgP27548 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cd40lgP27548 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.52□□□□□ -0.09
Cd40lgP27548 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cd40lgP27548 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Cd40lgP27548 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.52□□□□□ -0.09
Cd40lgP27548 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cd40lgP27548 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Cd40lgP27548 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.51□□□□□ -0.09
Cd40lgP27548 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cd40lgP27548 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms