Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col8a2P25318 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col8a2P25318 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col8a2P25318 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col8a2P25318 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Col8a2P25318 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Col8a2P25318 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.18□□□□□ -0.3
Col8a2P25318 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col8a2P25318 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col8a2P25318 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col8a2P25318 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col8a2P25318 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.18□□□□□ -0.3
Col8a2P25318 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Col8a2P25318 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col8a2P25318 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col8a2P25318 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col8a2P25318 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col8a2P25318 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col8a2P25318 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col8a2P25318 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Col8a2P25318 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col8a2P25318 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Col8a2P25318 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.17□□□□□ -0.3
Col8a2P25318 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.17□□□□□ -0.3
Col8a2P25318 Gm18733-201ENSMUST00000173950 856 ntBASIC13.17□□□□□ -0.3
Col8a2P25318 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.17□□□□□ -0.3
Col8a2P25318 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col8a2P25318 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.17□□□□□ -0.3
Col8a2P25318 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC13.17□□□□□ -0.3
Col8a2P25318 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.17□□□□□ -0.3
Col8a2P25318 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col8a2P25318 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Col8a2P25318 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col8a2P25318 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col8a2P25318 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col8a2P25318 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Col8a2P25318 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col8a2P25318 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col8a2P25318 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col8a2P25318 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col8a2P25318 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col8a2P25318 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.16□□□□□ -0.3
Col8a2P25318 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col8a2P25318 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Col8a2P25318 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Col8a2P25318 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col8a2P25318 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.16□□□□□ -0.3
Col8a2P25318 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col8a2P25318 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col8a2P25318 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col8a2P25318 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col8a2P25318 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col8a2P25318 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Col8a2P25318 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col8a2P25318 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col8a2P25318 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col8a2P25318 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col8a2P25318 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.16□□□□□ -0.3
Col8a2P25318 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col8a2P25318 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Col8a2P25318 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.16□□□□□ -0.3
Col8a2P25318 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.16□□□□□ -0.3
Col8a2P25318 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col8a2P25318 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col8a2P25318 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col8a2P25318 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Col8a2P25318 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col8a2P25318 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col8a2P25318 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col8a2P25318 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col8a2P25318 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.16□□□□□ -0.3
Col8a2P25318 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col8a2P25318 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col8a2P25318 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col8a2P25318 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col8a2P25318 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col8a2P25318 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col8a2P25318 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Col8a2P25318 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.15□□□□□ -0.3
Col8a2P25318 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col8a2P25318 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col8a2P25318 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col8a2P25318 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col8a2P25318 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col8a2P25318 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col8a2P25318 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col8a2P25318 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Col8a2P25318 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col8a2P25318 Gm5682-201ENSMUST00000173402 505 ntBASIC13.15□□□□□ -0.3
Col8a2P25318 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col8a2P25318 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col8a2P25318 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.15□□□□□ -0.3
Col8a2P25318 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col8a2P25318 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col8a2P25318 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col8a2P25318 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col8a2P25318 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col8a2P25318 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col8a2P25318 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col8a2P25318 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms