Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Gm7230-201ENSMUST00000173026 815 ntBASIC15.12■□□□□ 0.01
Cntn1P12960 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.12■□□□□ 0.01
Cntn1P12960 Gm6089-201ENSMUST00000197666 938 ntBASIC15.12■□□□□ 0.01
Cntn1P12960 Gm6443-201ENSMUST00000203599 874 ntBASIC15.12■□□□□ 0.01
Cntn1P12960 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.12■□□□□ 0.01
Cntn1P12960 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cntn1P12960 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.12■□□□□ 0.01
Cntn1P12960 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.12■□□□□ 0.01
Cntn1P12960 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cntn1P12960 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Cntn1P12960 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.12■□□□□ 0.01
Cntn1P12960 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cntn1P12960 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cntn1P12960 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cntn1P12960 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cntn1P12960 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cntn1P12960 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Cntn1P12960 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Cntn1P12960 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cntn1P12960 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Cntn1P12960 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cntn1P12960 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cntn1P12960 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cntn1P12960 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cntn1P12960 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Cntn1P12960 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Cntn1P12960 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cntn1P12960 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.11■□□□□ 0.01
Cntn1P12960 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.11■□□□□ 0.01
Cntn1P12960 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cntn1P12960 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Cntn1P12960 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cntn1P12960 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cntn1P12960 AW822252-206ENSMUST00000208904 237 ntBASIC15.11■□□□□ 0.01
Cntn1P12960 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cntn1P12960 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cntn1P12960 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Cntn1P12960 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Cntn1P12960 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cntn1P12960 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cntn1P12960 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.11■□□□□ 0.01
Cntn1P12960 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cntn1P12960 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cntn1P12960 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Cntn1P12960 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Cntn1P12960 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cntn1P12960 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Cntn1P12960 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cntn1P12960 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cntn1P12960 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cntn1P12960 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cntn1P12960 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cntn1P12960 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Cntn1P12960 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cntn1P12960 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cntn1P12960 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cntn1P12960 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cntn1P12960 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cntn1P12960 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cntn1P12960 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.1■□□□□ 0.01
Cntn1P12960 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.1■□□□□ 0.01
Cntn1P12960 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.1■□□□□ 0.01
Cntn1P12960 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Cntn1P12960 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cntn1P12960 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cntn1P12960 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cntn1P12960 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cntn1P12960 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.1■□□□□ 0.01
Cntn1P12960 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cntn1P12960 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cntn1P12960 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.1■□□□□ 0.01
Cntn1P12960 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cntn1P12960 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cntn1P12960 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.09■□□□□ 0.01
Cntn1P12960 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cntn1P12960 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cntn1P12960 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.09■□□□□ 0.01
Cntn1P12960 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cntn1P12960 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cntn1P12960 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cntn1P12960 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Cntn1P12960 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cntn1P12960 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cntn1P12960 Gm12350-201ENSMUST00000121208 462 ntBASIC15.09■□□□□ 0.01
Cntn1P12960 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cntn1P12960 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cntn1P12960 Gm43514-201ENSMUST00000198852 424 ntBASIC15.09■□□□□ 0.01
Cntn1P12960 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cntn1P12960 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cntn1P12960 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cntn1P12960 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cntn1P12960 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
Cntn1P12960 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cntn1P12960 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cntn1P12960 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cntn1P12960 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cntn1P12960 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cntn1P12960 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cntn1P12960 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cntn1P12960 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms