Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cxcl1P12850 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cxcl1P12850 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cxcl1P12850 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cxcl1P12850 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cxcl1P12850 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Cxcl1P12850 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cxcl1P12850 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cxcl1P12850 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cxcl1P12850 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cxcl1P12850 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cxcl1P12850 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cxcl1P12850 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.08□□□□□ -0.31
Cxcl1P12850 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Cxcl1P12850 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Cxcl1P12850 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cxcl1P12850 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl1P12850 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl1P12850 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl1P12850 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Cxcl1P12850 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl1P12850 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Cxcl1P12850 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl1P12850 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl1P12850 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl1P12850 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl1P12850 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl1P12850 Gm10812-201ENSMUST00000099864 546 ntBASIC13.08□□□□□ -0.32
Cxcl1P12850 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl1P12850 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl1P12850 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Cxcl1P12850 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl1P12850 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl1P12850 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl1P12850 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.08□□□□□ -0.32
Cxcl1P12850 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Cxcl1P12850 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl1P12850 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl1P12850 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Cxcl1P12850 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.08□□□□□ -0.32
Cxcl1P12850 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl1P12850 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
Cxcl1P12850 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl1P12850 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl1P12850 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.07□□□□□ -0.32
Cxcl1P12850 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.07□□□□□ -0.32
Cxcl1P12850 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl1P12850 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl1P12850 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl1P12850 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl1P12850 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl1P12850 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl1P12850 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl1P12850 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl1P12850 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl1P12850 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl1P12850 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC13.07□□□□□ -0.32
Cxcl1P12850 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.07□□□□□ -0.32
Cxcl1P12850 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl1P12850 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC13.07□□□□□ -0.32
Cxcl1P12850 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.07□□□□□ -0.32
Cxcl1P12850 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl1P12850 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Cxcl1P12850 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl1P12850 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl1P12850 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC13.07□□□□□ -0.32
Cxcl1P12850 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Cxcl1P12850 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl1P12850 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl1P12850 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl1P12850 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl1P12850 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl1P12850 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl1P12850 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Cxcl1P12850 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl1P12850 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl1P12850 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl1P12850 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Cxcl1P12850 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl1P12850 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl1P12850 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl1P12850 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Cxcl1P12850 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl1P12850 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl1P12850 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.06□□□□□ -0.32
Cxcl1P12850 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl1P12850 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl1P12850 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl1P12850 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.06□□□□□ -0.32
Cxcl1P12850 Gm13436-201ENSMUST00000120418 567 ntBASIC13.06□□□□□ -0.32
Cxcl1P12850 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.06□□□□□ -0.32
Cxcl1P12850 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.06□□□□□ -0.32
Cxcl1P12850 Gm10052-201ENSMUST00000168019 960 ntBASIC13.06□□□□□ -0.32
Cxcl1P12850 Gm44430-201ENSMUST00000203376 995 ntBASIC13.06□□□□□ -0.32
Cxcl1P12850 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Cxcl1P12850 Gm7729-201ENSMUST00000050143 801 ntBASIC13.06□□□□□ -0.32
Cxcl1P12850 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl1P12850 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Cxcl1P12850 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl1P12850 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms