Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.9□□□□□ -0.18
Ccl3P10855 Gm13616-201ENSMUST00000120600 222 ntBASIC13.9□□□□□ -0.18
Ccl3P10855 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Ccl3P10855 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Ccl3P10855 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.9□□□□□ -0.18
Ccl3P10855 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.9□□□□□ -0.18
Ccl3P10855 Gm45612-201ENSMUST00000211320 160 ntBASIC13.9□□□□□ -0.18
Ccl3P10855 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccl3P10855 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccl3P10855 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Ccl3P10855 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.9□□□□□ -0.18
Ccl3P10855 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.9□□□□□ -0.18
Ccl3P10855 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccl3P10855 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccl3P10855 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccl3P10855 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Ccl3P10855 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccl3P10855 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccl3P10855 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccl3P10855 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccl3P10855 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Ccl3P10855 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccl3P10855 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC13.9□□□□□ -0.19
Ccl3P10855 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.9□□□□□ -0.19
Ccl3P10855 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccl3P10855 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccl3P10855 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Ccl3P10855 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccl3P10855 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccl3P10855 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccl3P10855 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccl3P10855 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccl3P10855 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccl3P10855 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Ccl3P10855 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccl3P10855 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.89□□□□□ -0.19
Ccl3P10855 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccl3P10855 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccl3P10855 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.89□□□□□ -0.19
Ccl3P10855 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccl3P10855 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Ccl3P10855 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccl3P10855 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccl3P10855 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccl3P10855 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccl3P10855 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccl3P10855 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccl3P10855 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccl3P10855 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Ccl3P10855 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccl3P10855 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccl3P10855 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccl3P10855 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccl3P10855 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccl3P10855 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccl3P10855 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.88□□□□□ -0.19
Ccl3P10855 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccl3P10855 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccl3P10855 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Ccl3P10855 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccl3P10855 Gm13365-201ENSMUST00000121188 973 ntBASIC13.88□□□□□ -0.19
Ccl3P10855 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccl3P10855 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccl3P10855 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccl3P10855 Gm44335-201ENSMUST00000196879 141 ntBASIC13.88□□□□□ -0.19
Ccl3P10855 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.88□□□□□ -0.19
Ccl3P10855 Gm44297-201ENSMUST00000198304 141 ntBASIC13.88□□□□□ -0.19
Ccl3P10855 Gm44346-201ENSMUST00000198851 141 ntBASIC13.88□□□□□ -0.19
Ccl3P10855 Gm18246-201ENSMUST00000221023 728 ntBASIC13.88□□□□□ -0.19
Ccl3P10855 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccl3P10855 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccl3P10855 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC13.88□□□□□ -0.19
Ccl3P10855 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccl3P10855 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccl3P10855 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccl3P10855 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccl3P10855 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccl3P10855 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.88□□□□□ -0.19
Ccl3P10855 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Ccl3P10855 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccl3P10855 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccl3P10855 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccl3P10855 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccl3P10855 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccl3P10855 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccl3P10855 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccl3P10855 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ccl3P10855 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccl3P10855 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Ccl3P10855 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccl3P10855 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccl3P10855 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccl3P10855 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccl3P10855 Gm11745-201ENSMUST00000121669 448 ntBASIC13.87□□□□□ -0.19
Ccl3P10855 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccl3P10855 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.87□□□□□ -0.19
Ccl3P10855 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.87□□□□□ -0.19
Ccl3P10855 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccl3P10855 Gm5312-201ENSMUST00000203728 547 ntBASIC13.87□□□□□ -0.19
Ccl3P10855 Thap2-203ENSMUST00000218989 527 ntBASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms