Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp6P0C0A3 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.19■□□□□ 0.34
Chmp6P0C0A3 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp6P0C0A3 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Chmp6P0C0A3 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
Chmp6P0C0A3 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.19■□□□□ 0.34
Chmp6P0C0A3 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp6P0C0A3 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.19■□□□□ 0.34
Chmp6P0C0A3 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp6P0C0A3 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp6P0C0A3 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp6P0C0A3 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp6P0C0A3 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp6P0C0A3 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp6P0C0A3 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Chmp6P0C0A3 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp6P0C0A3 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp6P0C0A3 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp6P0C0A3 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp6P0C0A3 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.18■□□□□ 0.34
Chmp6P0C0A3 Gm12895-201ENSMUST00000122214 226 ntBASIC17.18■□□□□ 0.34
Chmp6P0C0A3 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.18■□□□□ 0.34
Chmp6P0C0A3 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.18■□□□□ 0.34
Chmp6P0C0A3 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.18■□□□□ 0.34
Chmp6P0C0A3 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.18■□□□□ 0.34
Chmp6P0C0A3 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp6P0C0A3 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp6P0C0A3 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp6P0C0A3 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Chmp6P0C0A3 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Chmp6P0C0A3 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp6P0C0A3 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp6P0C0A3 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp6P0C0A3 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Chmp6P0C0A3 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp6P0C0A3 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp6P0C0A3 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp6P0C0A3 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp6P0C0A3 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Chmp6P0C0A3 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp6P0C0A3 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Chmp6P0C0A3 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp6P0C0A3 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp6P0C0A3 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Chmp6P0C0A3 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp6P0C0A3 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Chmp6P0C0A3 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp6P0C0A3 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp6P0C0A3 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp6P0C0A3 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp6P0C0A3 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp6P0C0A3 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp6P0C0A3 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp6P0C0A3 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Chmp6P0C0A3 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp6P0C0A3 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp6P0C0A3 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp6P0C0A3 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp6P0C0A3 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp6P0C0A3 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Chmp6P0C0A3 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp6P0C0A3 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.17■□□□□ 0.34
Chmp6P0C0A3 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp6P0C0A3 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp6P0C0A3 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.17■□□□□ 0.34
Chmp6P0C0A3 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp6P0C0A3 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp6P0C0A3 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp6P0C0A3 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp6P0C0A3 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp6P0C0A3 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp6P0C0A3 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp6P0C0A3 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp6P0C0A3 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp6P0C0A3 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.16■□□□□ 0.34
Chmp6P0C0A3 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.16■□□□□ 0.34
Chmp6P0C0A3 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.16■□□□□ 0.34
Chmp6P0C0A3 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp6P0C0A3 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.16■□□□□ 0.34
Chmp6P0C0A3 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.16■□□□□ 0.34
Chmp6P0C0A3 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.16■□□□□ 0.34
Chmp6P0C0A3 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.16■□□□□ 0.34
Chmp6P0C0A3 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp6P0C0A3 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp6P0C0A3 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp6P0C0A3 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp6P0C0A3 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp6P0C0A3 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp6P0C0A3 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp6P0C0A3 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp6P0C0A3 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Chmp6P0C0A3 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp6P0C0A3 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.15■□□□□ 0.34
Chmp6P0C0A3 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Chmp6P0C0A3 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.15■□□□□ 0.34
Chmp6P0C0A3 Gm27867-201ENSMUST00000184778 125 ntBASIC17.15■□□□□ 0.34
Chmp6P0C0A3 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.15■□□□□ 0.34
Chmp6P0C0A3 Gm44454-201ENSMUST00000198541 138 ntBASIC17.15■□□□□ 0.34
Chmp6P0C0A3 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.15■□□□□ 0.34
Chmp6P0C0A3 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms