Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P06344 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
P06344 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
P06344 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.05□□□□□ -0.16
P06344 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
P06344 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
P06344 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P06344 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
P06344 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P06344 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P06344 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
P06344 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
P06344 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P06344 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P06344 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P06344 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
P06344 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P06344 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
P06344 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P06344 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P06344 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P06344 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
P06344 Asic1-205ENSMUST00000228185 1818 ntBASIC14.04□□□□□ -0.16
P06344 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
P06344 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
P06344 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P06344 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P06344 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
P06344 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
P06344 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
P06344 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P06344 Gm13418-201ENSMUST00000119097 944 ntBASIC14.04□□□□□ -0.16
P06344 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
P06344 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.04□□□□□ -0.16
P06344 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.04□□□□□ -0.16
P06344 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.04□□□□□ -0.16
P06344 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
P06344 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P06344 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P06344 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P06344 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
P06344 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.04□□□□□ -0.16
P06344 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.04□□□□□ -0.16
P06344 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
P06344 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P06344 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
P06344 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
P06344 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
P06344 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
P06344 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
P06344 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
P06344 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.03□□□□□ -0.16
P06344 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.03□□□□□ -0.16
P06344 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
P06344 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
P06344 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.03□□□□□ -0.16
P06344 Gm44771-201ENSMUST00000206975 626 ntBASIC14.03□□□□□ -0.16
P06344 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
P06344 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
P06344 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.03□□□□□ -0.16
P06344 Gm8655-201ENSMUST00000221159 852 ntBASIC14.03□□□□□ -0.16
P06344 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
P06344 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
P06344 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
P06344 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
P06344 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
P06344 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
P06344 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
P06344 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.03□□□□□ -0.16
P06344 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
P06344 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
P06344 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
P06344 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
P06344 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
P06344 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
P06344 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
P06344 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
P06344 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
P06344 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
P06344 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
P06344 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
P06344 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
P06344 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
P06344 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
P06344 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
P06344 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
P06344 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
P06344 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
P06344 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
P06344 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
P06344 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
P06344 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
P06344 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
P06344 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
P06344 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
P06344 Gm25990-201ENSMUST00000102440 86 ntBASIC14.02□□□□□ -0.17
P06344 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
P06344 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.17
P06344 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.02□□□□□ -0.17
P06344 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms