Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC13.88□□□□□ -0.19
P04224 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.88□□□□□ -0.19
P04224 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
P04224 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
P04224 Gm12527-201ENSMUST00000117967 564 ntBASIC13.88□□□□□ -0.19
P04224 Gm7638-201ENSMUST00000121348 967 ntBASIC13.88□□□□□ -0.19
P04224 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
P04224 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
P04224 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC13.88□□□□□ -0.19
P04224 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
P04224 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
P04224 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
P04224 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P04224 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
P04224 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
P04224 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P04224 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P04224 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P04224 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.87□□□□□ -0.19
P04224 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
P04224 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
P04224 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.87□□□□□ -0.19
P04224 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P04224 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
P04224 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
P04224 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC13.87□□□□□ -0.19
P04224 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC13.87□□□□□ -0.19
P04224 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P04224 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P04224 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P04224 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
P04224 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
P04224 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P04224 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
P04224 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P04224 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.87□□□□□ -0.19
P04224 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P04224 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
P04224 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
P04224 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
P04224 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
P04224 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
P04224 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
P04224 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
P04224 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
P04224 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
P04224 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
P04224 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
P04224 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
P04224 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
P04224 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
P04224 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
P04224 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
P04224 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC13.86□□□□□ -0.19
P04224 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC13.86□□□□□ -0.19
P04224 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
P04224 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
P04224 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
P04224 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
P04224 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
P04224 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
P04224 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
P04224 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
P04224 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.85□□□□□ -0.19
P04224 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
P04224 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
P04224 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.85□□□□□ -0.19
P04224 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
P04224 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
P04224 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
P04224 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
P04224 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
P04224 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
P04224 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
P04224 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
P04224 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC13.85□□□□□ -0.19
P04224 Gm10698-201ENSMUST00000182663 604 ntBASIC13.85□□□□□ -0.19
P04224 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
P04224 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
P04224 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.85□□□□□ -0.19
P04224 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
P04224 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
P04224 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
P04224 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
P04224 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
P04224 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
P04224 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
P04224 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
P04224 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
P04224 Gm7712-202ENSMUST00000222331 1510 ntBASIC13.85□□□□□ -0.19
P04224 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
P04224 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
P04224 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
P04224 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
P04224 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
P04224 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
P04224 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.84□□□□□ -0.19
P04224 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
P04224 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
P04224 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms