Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.66□□□□□ -0.22
Igh-VJ558P01758 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Igh-VJ558P01758 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Igh-VJ558P01758 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Igh-VJ558P01758 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Igh-VJ558P01758 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Igh-VJ558P01758 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Igh-VJ558P01758 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Igh-VJ558P01758 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Igh-VJ558P01758 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
Igh-VJ558P01758 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Igh-VJ558P01758 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Igh-VJ558P01758 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Igh-VJ558P01758 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Igh-VJ558P01758 Gm15372-201ENSMUST00000120729 834 ntBASIC13.65□□□□□ -0.22
Igh-VJ558P01758 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Igh-VJ558P01758 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Igh-VJ558P01758 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Igh-VJ558P01758 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Igh-VJ558P01758 Gm7367-201ENSMUST00000057611 492 ntBASIC13.65□□□□□ -0.22
Igh-VJ558P01758 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Igh-VJ558P01758 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.65□□□□□ -0.22
Igh-VJ558P01758 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Igh-VJ558P01758 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Igh-VJ558P01758 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Igh-VJ558P01758 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Igh-VJ558P01758 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC13.65□□□□□ -0.22
Igh-VJ558P01758 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.65□□□□□ -0.22
Igh-VJ558P01758 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.23
Igh-VJ558P01758 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Igh-VJ558P01758 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Igh-VJ558P01758 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Igh-VJ558P01758 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Igh-VJ558P01758 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.64□□□□□ -0.23
Igh-VJ558P01758 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Igh-VJ558P01758 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Igh-VJ558P01758 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Igh-VJ558P01758 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Igh-VJ558P01758 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Igh-VJ558P01758 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.64□□□□□ -0.23
Igh-VJ558P01758 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Igh-VJ558P01758 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Igh-VJ558P01758 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.64□□□□□ -0.23
Igh-VJ558P01758 AC124569.2-201ENSMUST00000225998 818 ntBASIC13.64□□□□□ -0.23
Igh-VJ558P01758 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Igh-VJ558P01758 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Igh-VJ558P01758 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Igh-VJ558P01758 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Igh-VJ558P01758 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Igh-VJ558P01758 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Igh-VJ558P01758 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Igh-VJ558P01758 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Igh-VJ558P01758 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Igh-VJ558P01758 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igh-VJ558P01758 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Igh-VJ558P01758 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Igh-VJ558P01758 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igh-VJ558P01758 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igh-VJ558P01758 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igh-VJ558P01758 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Igh-VJ558P01758 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Igh-VJ558P01758 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igh-VJ558P01758 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Igh-VJ558P01758 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igh-VJ558P01758 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igh-VJ558P01758 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Igh-VJ558P01758 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igh-VJ558P01758 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igh-VJ558P01758 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Igh-VJ558P01758 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igh-VJ558P01758 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igh-VJ558P01758 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.63□□□□□ -0.23
Igh-VJ558P01758 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igh-VJ558P01758 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igh-VJ558P01758 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Igh-VJ558P01758 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Igh-VJ558P01758 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igh-VJ558P01758 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igh-VJ558P01758 Gm25745-201ENSMUST00000174945 133 ntBASIC13.63□□□□□ -0.23
Igh-VJ558P01758 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igh-VJ558P01758 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igh-VJ558P01758 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igh-VJ558P01758 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igh-VJ558P01758 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igh-VJ558P01758 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Igh-VJ558P01758 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Igh-VJ558P01758 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igh-VJ558P01758 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igh-VJ558P01758 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Igh-VJ558P01758 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Igh-VJ558P01758 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Igh-VJ558P01758 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Igh-VJ558P01758 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Igh-VJ558P01758 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Igh-VJ558P01758 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Igh-VJ558P01758 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Igh-VJ558P01758 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Igh-VJ558P01758 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Igh-VJ558P01758 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.62□□□□□ -0.23
Igh-VJ558P01758 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms