Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.99■□□□□ 0.31
Vti1aO89116 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vti1aO89116 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.99■□□□□ 0.31
Vti1aO89116 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Vti1aO89116 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vti1aO89116 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.99■□□□□ 0.31
Vti1aO89116 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vti1aO89116 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Vti1aO89116 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Vti1aO89116 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vti1aO89116 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vti1aO89116 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.99■□□□□ 0.31
Vti1aO89116 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vti1aO89116 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vti1aO89116 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Vti1aO89116 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vti1aO89116 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.99■□□□□ 0.31
Vti1aO89116 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vti1aO89116 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vti1aO89116 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Vti1aO89116 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Vti1aO89116 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vti1aO89116 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.98■□□□□ 0.31
Vti1aO89116 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vti1aO89116 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vti1aO89116 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Vti1aO89116 Gm6550-201ENSMUST00000187574 993 ntBASIC16.98■□□□□ 0.31
Vti1aO89116 Gm6089-201ENSMUST00000197666 938 ntBASIC16.98■□□□□ 0.31
Vti1aO89116 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Vti1aO89116 AV026068-213ENSMUST00000223675 1171 ntBASIC16.98■□□□□ 0.31
Vti1aO89116 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vti1aO89116 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vti1aO89116 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Vti1aO89116 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vti1aO89116 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.98■□□□□ 0.31
Vti1aO89116 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vti1aO89116 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Vti1aO89116 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vti1aO89116 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vti1aO89116 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vti1aO89116 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vti1aO89116 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Vti1aO89116 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vti1aO89116 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vti1aO89116 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vti1aO89116 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.97■□□□□ 0.31
Vti1aO89116 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vti1aO89116 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Vti1aO89116 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vti1aO89116 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vti1aO89116 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.97■□□□□ 0.31
Vti1aO89116 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.97■□□□□ 0.31
Vti1aO89116 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vti1aO89116 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Vti1aO89116 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Vti1aO89116 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vti1aO89116 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vti1aO89116 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vti1aO89116 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vti1aO89116 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vti1aO89116 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vti1aO89116 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Vti1aO89116 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vti1aO89116 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vti1aO89116 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vti1aO89116 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Vti1aO89116 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vti1aO89116 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vti1aO89116 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vti1aO89116 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vti1aO89116 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vti1aO89116 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vti1aO89116 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Vti1aO89116 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vti1aO89116 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Vti1aO89116 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Vti1aO89116 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.96■□□□□ 0.31
Vti1aO89116 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vti1aO89116 Gm36967-201ENSMUST00000193814 266 ntBASIC16.96■□□□□ 0.31
Vti1aO89116 Gm9172-201ENSMUST00000212092 954 ntBASIC16.96■□□□□ 0.31
Vti1aO89116 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.96■□□□□ 0.31
Vti1aO89116 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.96■□□□□ 0.31
Vti1aO89116 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vti1aO89116 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Vti1aO89116 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vti1aO89116 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vti1aO89116 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
Vti1aO89116 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Vti1aO89116 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vti1aO89116 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Vti1aO89116 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Vti1aO89116 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Vti1aO89116 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vti1aO89116 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.95■□□□□ 0.3
Vti1aO89116 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vti1aO89116 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.95■□□□□ 0.3
Vti1aO89116 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Vti1aO89116 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vti1aO89116 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vti1aO89116 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms