Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cops3O88543 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cops3O88543 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cops3O88543 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cops3O88543 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cops3O88543 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cops3O88543 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cops3O88543 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cops3O88543 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cops3O88543 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cops3O88543 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cops3O88543 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cops3O88543 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cops3O88543 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.17□□□□□ -0.14
Cops3O88543 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cops3O88543 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cops3O88543 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.17□□□□□ -0.14
Cops3O88543 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cops3O88543 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.17□□□□□ -0.14
Cops3O88543 Mir5130-201ENSMUST00000175160 84 ntBASIC14.17□□□□□ -0.14
Cops3O88543 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Cops3O88543 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.17□□□□□ -0.14
Cops3O88543 Gm7889-201ENSMUST00000185591 958 ntBASIC14.17□□□□□ -0.14
Cops3O88543 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cops3O88543 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cops3O88543 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cops3O88543 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.17□□□□□ -0.14
Cops3O88543 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cops3O88543 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cops3O88543 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cops3O88543 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cops3O88543 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.17□□□□□ -0.14
Cops3O88543 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cops3O88543 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cops3O88543 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cops3O88543 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cops3O88543 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cops3O88543 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cops3O88543 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cops3O88543 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cops3O88543 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Cops3O88543 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cops3O88543 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cops3O88543 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Cops3O88543 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cops3O88543 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cops3O88543 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cops3O88543 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cops3O88543 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cops3O88543 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.16□□□□□ -0.14
Cops3O88543 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Cops3O88543 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cops3O88543 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.16□□□□□ -0.14
Cops3O88543 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cops3O88543 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cops3O88543 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.16□□□□□ -0.14
Cops3O88543 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cops3O88543 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cops3O88543 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cops3O88543 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.16□□□□□ -0.14
Cops3O88543 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cops3O88543 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Cops3O88543 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.15□□□□□ -0.14
Cops3O88543 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cops3O88543 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Cops3O88543 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cops3O88543 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cops3O88543 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cops3O88543 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Cops3O88543 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cops3O88543 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cops3O88543 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cops3O88543 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cops3O88543 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cops3O88543 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cops3O88543 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cops3O88543 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.15□□□□□ -0.14
Cops3O88543 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cops3O88543 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cops3O88543 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cops3O88543 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cops3O88543 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cops3O88543 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cops3O88543 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cops3O88543 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cops3O88543 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cops3O88543 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Cops3O88543 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cops3O88543 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cops3O88543 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cops3O88543 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.15□□□□□ -0.14
Cops3O88543 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cops3O88543 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cops3O88543 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cops3O88543 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cops3O88543 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cops3O88543 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.14□□□□□ -0.15
Cops3O88543 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cops3O88543 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.14□□□□□ -0.15
Cops3O88543 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms