Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.14□□□□□ -0.15
Col5a1O88207 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Col5a1O88207 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col5a1O88207 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col5a1O88207 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.14□□□□□ -0.15
Col5a1O88207 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col5a1O88207 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Col5a1O88207 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col5a1O88207 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Col5a1O88207 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col5a1O88207 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col5a1O88207 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col5a1O88207 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col5a1O88207 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col5a1O88207 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col5a1O88207 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Col5a1O88207 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col5a1O88207 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Col5a1O88207 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col5a1O88207 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.13□□□□□ -0.15
Col5a1O88207 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col5a1O88207 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.13□□□□□ -0.15
Col5a1O88207 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.13□□□□□ -0.15
Col5a1O88207 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col5a1O88207 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col5a1O88207 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col5a1O88207 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.13□□□□□ -0.15
Col5a1O88207 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Col5a1O88207 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.13□□□□□ -0.15
Col5a1O88207 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col5a1O88207 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col5a1O88207 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col5a1O88207 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Col5a1O88207 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col5a1O88207 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Col5a1O88207 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col5a1O88207 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col5a1O88207 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col5a1O88207 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Col5a1O88207 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col5a1O88207 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
Col5a1O88207 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col5a1O88207 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col5a1O88207 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.13□□□□□ -0.15
Col5a1O88207 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.12□□□□□ -0.15
Col5a1O88207 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col5a1O88207 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col5a1O88207 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col5a1O88207 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.12□□□□□ -0.15
Col5a1O88207 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Col5a1O88207 Rprl2-201ENSMUST00000157150 290 ntBASIC14.12□□□□□ -0.15
Col5a1O88207 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.12□□□□□ -0.15
Col5a1O88207 Gm27301-201ENSMUST00000184012 127 ntBASIC14.12□□□□□ -0.15
Col5a1O88207 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col5a1O88207 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col5a1O88207 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col5a1O88207 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col5a1O88207 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col5a1O88207 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col5a1O88207 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col5a1O88207 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.12□□□□□ -0.15
Col5a1O88207 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col5a1O88207 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col5a1O88207 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col5a1O88207 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col5a1O88207 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.11□□□□□ -0.15
Col5a1O88207 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col5a1O88207 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col5a1O88207 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.11□□□□□ -0.15
Col5a1O88207 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.11□□□□□ -0.15
Col5a1O88207 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col5a1O88207 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col5a1O88207 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col5a1O88207 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col5a1O88207 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col5a1O88207 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col5a1O88207 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col5a1O88207 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col5a1O88207 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.11□□□□□ -0.15
Col5a1O88207 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col5a1O88207 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.11□□□□□ -0.15
Col5a1O88207 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col5a1O88207 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col5a1O88207 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col5a1O88207 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.11□□□□□ -0.15
Col5a1O88207 Gm18889-201ENSMUST00000174284 929 ntBASIC14.11□□□□□ -0.15
Col5a1O88207 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.11□□□□□ -0.15
Col5a1O88207 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col5a1O88207 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col5a1O88207 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col5a1O88207 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col5a1O88207 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col5a1O88207 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col5a1O88207 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col5a1O88207 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Col5a1O88207 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Col5a1O88207 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Col5a1O88207 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Col5a1O88207 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.1□□□□□ -0.15
Col5a1O88207 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms