Protein–RNA interactions for Protein: O70401

Tspan6, Tetraspanin-6, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan6O70401 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Tspan6O70401 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
Tspan6O70401 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Tspan6O70401 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tspan6O70401 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tspan6O70401 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Tspan6O70401 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tspan6O70401 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tspan6O70401 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
Tspan6O70401 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tspan6O70401 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
Tspan6O70401 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Tspan6O70401 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tspan6O70401 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Tspan6O70401 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Tspan6O70401 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tspan6O70401 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tspan6O70401 Gm4899-201ENSMUST00000178708 719 ntBASIC15.35■□□□□ 0.05
Tspan6O70401 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.35■□□□□ 0.05
Tspan6O70401 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.35■□□□□ 0.05
Tspan6O70401 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tspan6O70401 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tspan6O70401 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Tspan6O70401 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Tspan6O70401 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tspan6O70401 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tspan6O70401 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tspan6O70401 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tspan6O70401 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Tspan6O70401 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tspan6O70401 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Tspan6O70401 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Tspan6O70401 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Tspan6O70401 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tspan6O70401 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tspan6O70401 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.34■□□□□ 0.05
Tspan6O70401 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Tspan6O70401 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Tspan6O70401 Gm4995-201ENSMUST00000117247 432 ntBASIC15.34■□□□□ 0.05
Tspan6O70401 Gm14822-201ENSMUST00000122247 291 ntBASIC15.34■□□□□ 0.05
Tspan6O70401 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.34■□□□□ 0.05
Tspan6O70401 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Tspan6O70401 Gm27300-201ENSMUST00000184085 97 ntBASIC15.34■□□□□ 0.05
Tspan6O70401 Gm27335-201ENSMUST00000184758 97 ntBASIC15.34■□□□□ 0.05
Tspan6O70401 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.34■□□□□ 0.05
Tspan6O70401 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.34■□□□□ 0.05
Tspan6O70401 Gm9682-201ENSMUST00000197505 556 ntBASIC15.34■□□□□ 0.05
Tspan6O70401 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Tspan6O70401 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Tspan6O70401 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tspan6O70401 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Tspan6O70401 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tspan6O70401 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Tspan6O70401 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tspan6O70401 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tspan6O70401 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Tspan6O70401 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tspan6O70401 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tspan6O70401 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tspan6O70401 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tspan6O70401 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tspan6O70401 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Tspan6O70401 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tspan6O70401 Gm23935-201ENSMUST00000102303 57 ntBASIC15.33■□□□□ 0.04
Tspan6O70401 Gm24270-201ENSMUST00000102326 57 ntBASIC15.33■□□□□ 0.04
Tspan6O70401 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tspan6O70401 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tspan6O70401 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tspan6O70401 Gm24245-201ENSMUST00000157318 57 ntBASIC15.33■□□□□ 0.04
Tspan6O70401 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.33■□□□□ 0.04
Tspan6O70401 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.33■□□□□ 0.04
Tspan6O70401 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tspan6O70401 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tspan6O70401 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tspan6O70401 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.33■□□□□ 0.04
Tspan6O70401 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tspan6O70401 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tspan6O70401 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tspan6O70401 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tspan6O70401 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tspan6O70401 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tspan6O70401 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tspan6O70401 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.32■□□□□ 0.04
Tspan6O70401 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tspan6O70401 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tspan6O70401 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tspan6O70401 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tspan6O70401 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC15.32■□□□□ 0.04
Tspan6O70401 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.32■□□□□ 0.04
Tspan6O70401 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.32■□□□□ 0.04
Tspan6O70401 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Tspan6O70401 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.32■□□□□ 0.04
Tspan6O70401 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.32■□□□□ 0.04
Tspan6O70401 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tspan6O70401 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tspan6O70401 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tspan6O70401 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tspan6O70401 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tspan6O70401 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tspan6O70401 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms